RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 GRK3P35626 688 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 C5orf22Q49AR2 442 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 COBLL1Q53SF7 1204 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 TMEM63BQ5T3F8 832 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF658Q5TYW1 1059 aaPredicted RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 CCSAPQ6IQ19 270 aaPredicted RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 GPIHBP1Q8IV16 184 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 RBM7Q9Y580 266 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 SNX14Q9Y5W7 946 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 TCHHQ07283 1943 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 FAM47DPA6NHR8 397 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 TRIM3O75382 744 aaPredicted RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ILF3Q12906 894 aaKnown RBP eCLIP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ATP1A4Q13733 1029 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 TSHZ1Q6ZSZ6 1077 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 CLYBLQ8N0X4 340 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF579Q8NAF0 562 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 TM6SF1Q9BZW5 370 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 THAP9Q9H5L6 903 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 XKR8Q9H6D3 395 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 RPH3AQ9Y2J0 694 aaPredicted RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 KIAA1107Q9UPP5 1409 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 MYL12BO14950 172 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 TNFAIP8O95379 198 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 FTCDO95954 541 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 RALAP11233 206 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 PRKAR2AP13861 404 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 BTKQ06187 659 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ZYXQ15942 572 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 EPC2Q52LR7 807 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF667Q5HYK9 610 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 COPS6Q7L5N1 327 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 NSL1Q96IY1 281 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 GSDMCQ9BYG8 508 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 PAIP1Q9H074 479 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 MAFFQ9ULX9 164 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 MAPRE3Q9UPY8 281 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 CYP2D6P10635 497 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 AKT1P31749 480 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ALKBH5Q6P6C2 394 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 DPP9Q86TI2 863 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 PRPF39Q86UA1 669 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 SUGP1Q8IWZ8 645 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 EID3Q8N140 333 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 FAM135AQ9P2D6 1515 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ZW10O43264 779 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 EPN2O95208 641 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 BCAR1P56945 870 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 GNA13Q14344 377 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 EIF3MQ7L2H7 374 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 CHSY1Q86X52 802 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 CENPLQ8N0S6 344 aaPredicted RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 TSPAN14Q8NG11 270 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 EEF1AKMT1Q8WVE0 214 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 S100ZQ8WXG8 99 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 JADE3Q92613 823 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 SLC9A2Q9UBY0 812 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 C3orf70A6NLC5 250 aaPredicted RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 CYBBP04839 570 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 SDC4P31431 198 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ADARP55265 1226 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ST8SIA6P61647 398 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 OTUD4Q01804 1114 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 VEPH1Q14D04 833 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 TNFAIP8L3Q5GJ75 292 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 HECTD3Q5T447 861 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 SNX31Q8N9S9 440 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ATG16L2Q8NAA4 619 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 URGCPQ8TCY9 931 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ABCC8Q09428 1581 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 K7ERI5 159 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 TMCC2O75069 709 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 APOL3O95236 402 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ANXA6P08133 673 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 PDIA2Q13087 525 aaKnown RBP9.3□□□□□ -0.92
NIPBL-202ENST00000448238 CAPSLQ8WWF8 208 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 PTPRN2Q92932 1015 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 MEIS3Q99687 375 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 HINFPQ9BQA5 517 aa9.3□□□□□ -0.92
NIPBL-202ENST00000448238 ANO9A1A5B4 782 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 B2RBV5 119 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 PRKAR1AP10644 381 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 PTK6Q13882 451 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 ARHGEF7Q14155 803 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 LACTB2Q53H82 288 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 MAGEE2Q8TD90 523 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 COX4I2Q96KJ9 171 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 SLC4A9Q96Q91 983 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 CDH7Q9ULB5 785 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 WRBO00258 174 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 MYCP01106 439 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 ITIH1P19827 911 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 TUBA1BP68363 451 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 TTC27Q6P3X3 843 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 TUBA1AQ71U36 451 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 PROM2Q8N271 834 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 ZCWPW1Q9H0M4 648 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 RIBC2Q9H4K1 309 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF532Q9HCE3 1301 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms