RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 SF3B1O75533 1304 aaKnown RBP eCLIP8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 ANK1P16157 1881 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 EPOPA6NHQ4 379 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 SYN3O14994 580 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 GRM6O15303 877 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 TEX33O43247 280 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 HUS1O60921 280 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 SOD2P04179 222 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 FAM163BP0C2L3 166 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 P4HA1P13674 534 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 SLC9A1P19634 815 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 TYMPP19971 482 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 FGFR3P22607 806 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 DNAJB1P25685 340 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 UBASH3AP57075 661 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 USP46P62068 366 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 NOP14P78316 857 aaKnown RBP8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 UBE3AQ05086 875 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 GPM6BQ13491 265 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 SOWAHAQ2M3V2 549 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 UVSSAQ2YD98 709 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 USP41Q3LFD5 358 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 ZNF667Q5HYK9 610 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 HABP4Q5JVS0 413 aaKnown RBP8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 KIAA0319Q5VV43 1072 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 WSCD1Q658N2 575 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 PHLDB3Q6NSJ2 640 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 DPY19L2P1Q6NXN4 242 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 TRIM65Q6PJ69 517 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 DPH6Q7L8W6 267 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 CEP57Q86XR8 500 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 TOP6BLQ8N6T0 577 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 APPL2Q8NEU8 664 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 POF1BQ8WVV4 589 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 FAXDC2Q96IV6 333 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 B3GALT6Q96L58 329 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 MMS19Q96T76 1030 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 TTPALQ9BTX7 342 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 IMPG2Q9BZV3 1241 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 INTS2Q9H0H0 1204 aaKnown RBP8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 TTYH1Q9H313 450 aaPredicted RBP8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 GCNT4Q9P109 453 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 POLIQ9UNA4 740 aa8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 TIMM13Q9Y5L4 95 aaPredicted RBP8.09□□□□□ -1.11
AC004540.1-206ENST00000448056 CHD7Q9P2D1 2997 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 TDRD15B5MCY1 1934 aaKnown RBP8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 TMEM265A0A087WTH1 108 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 ARHGEF37A1IGU5 675 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 RFXAPO00287 272 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 AP5Z1O43299 807 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 LPXNO60711 386 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 LILRB3O75022 631 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 TACC1O75410 805 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 OAZ2O95190 189 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 CXCL14O95715 111 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 CYP11A1P05108 521 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 WEE2P0C1S8 567 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 CTSAP10619 480 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 ODC1P11926 461 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 TKTP29401 623 aaKnown RBP8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 ASPAP45381 313 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 CDH8P55286 799 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 ERVFC1P60507 584 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 TNNC1P63316 161 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 APBA1Q02410 837 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 DSG1Q02413 1049 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 LRMPQ12912 555 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 CAMK1Q14012 370 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 MRPL58Q14197 206 aaKnown RBP8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 SKIV2LQ15477 1246 aaKnown RBP8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 RTP2Q5QGT7 225 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 KLHDC7AQ5VTJ3 777 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 KIAA1841Q6NSI8 718 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 SARM1Q6SZW1 724 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 NYAP1Q6ZVC0 841 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 TMC7Q7Z402 723 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 METTL23Q86XA0 190 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 GPR65Q8IYL9 337 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 TMEM86AQ8N2M4 240 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 PDCL2Q8N4E4 241 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 MRPL43Q8N983 215 aaKnown RBP8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 LNX1Q8TBB1 728 aaPredicted RBP8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 NT5C1BQ96P26 610 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 ERGIC2Q96RQ1 377 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 HERC2P3Q9BVR0 1158 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 PRR14Q9BWN1 585 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 BCO2Q9BYV7 579 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 NIF3L1Q9GZT8 377 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 CYP3A43Q9HB55 503 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 SIX2Q9NPC8 291 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 UBE2TQ9NPD8 197 aaPredicted RBP8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 IFNKQ9P0W0 207 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 DSEQ9UL01 958 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 L1RE1Q9UN81 338 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 SIK3Q9Y2K2 1263 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 TRIOBPQ9H2D6 2365 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 RALGAPA2Q2PPJ7 1873 aa8.08□□□□□ -1.12
AC004540.1-206ENST00000448056 A0A1W2PQC6 194 aa8.07□□□□□ -1.12
AC004540.1-206ENST00000448056 GABRDO14764 452 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms