RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 SLC9C2Q5TAH2 1124 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 USP17L6PQ6QN14 398 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 KRT28Q7Z3Y7 464 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 SLC44A2Q8IWA5 706 aaPredicted RBP4.31□□□□□ -1.72
PMS1-216ENST00000447734 NRSN1Q8IZ57 195 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 POU5F2Q8N7G0 328 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 OR7D4Q8NG98 312 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 OR6Y1Q8NGX8 325 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 OR56A3Q8NH54 315 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 PPP1R14CQ8TAE6 165 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 IGDCC4Q8TDY8 1250 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 BCL7CQ8WUZ0 217 aaPredicted RBP4.31□□□□□ -1.72
PMS1-216ENST00000447734 SDCCAG3Q96C92 435 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 NEIL1Q96FI4 390 aaPredicted RBP4.31□□□□□ -1.72
PMS1-216ENST00000447734 TOE1Q96GM8 510 aaKnown RBP4.31□□□□□ -1.72
PMS1-216ENST00000447734 RADILQ96JH8 1075 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 ASB2Q96Q27 587 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 TWNKQ96RR1 684 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 BAG1Q99933 345 aaPredicted RBP4.31□□□□□ -1.72
PMS1-216ENST00000447734 SLF1Q9BQI6 1058 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 RTKNQ9BST9 563 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 KRTAP4-5Q9BYR2 181 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 HAPLN2Q9GZV7 340 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 PRDM8Q9NQV8 689 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 PLSCR4Q9NRQ2 329 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 TMEM140Q9NV12 185 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 SIDT1Q9NXL6 827 aaKnown RBP4.31□□□□□ -1.72
PMS1-216ENST00000447734 EBF1Q9UH73 591 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 DNAI1Q9UI46 699 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 MID2Q9UJV3 735 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 AJAP1Q9UKB5 411 aaPredicted RBP4.31□□□□□ -1.72
PMS1-216ENST00000447734 ZDHHC8Q9ULC8 765 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 TBX20Q9UMR3 447 aa4.31□□□□□ -1.72
PMS1-216ENST00000447734 A0A087WZ62 844 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 TMEM233B4DJY2 109 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 H0Y3Z8 333 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 H0Y858 1186 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 GLP2RO95838 553 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 LRG1P02750 347 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 ANXA1P04083 346 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 F13BP05160 661 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 PRKCBP05771 671 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 APOA4P06727 396 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 ENO2P09104 434 aaPredicted RBP4.3□□□□□ -1.72
PMS1-216ENST00000447734 ZGLP1P0C6A0 271 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 TGFB3P10600 412 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 PHKA1P46020 1223 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 CCR9P51686 369 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 ALDH18A1P54886 795 aaKnown RBP4.3□□□□□ -1.72
PMS1-216ENST00000447734 NOMO3P69849 1222 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 KRT83P78385 493 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 CYP4F8P98187 520 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 SCAPQ12770 1279 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 MTM1Q13496 603 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 MAPKAPK3Q16644 382 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 RILPL1Q5EBL4 403 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 UBXN11Q5T124 520 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 TMTC4Q5T4D3 741 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 ATPAF1Q5TC12 328 aaPredicted RBP4.3□□□□□ -1.72
PMS1-216ENST00000447734 DCAF12L1Q5VU92 463 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 VASNQ6EMK4 673 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 SLC30A6Q6NXT4 461 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 NFRKBQ6P4R8 1299 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 CRTC1Q6UUV9 634 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 BBS12Q6ZW61 710 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 RRAGAQ7L523 313 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 PLD6Q8N2A8 252 aaKnown RBP4.3□□□□□ -1.72
PMS1-216ENST00000447734 TMEM57Q8N5G2 664 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 DNAJC5GQ8N7S2 189 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 DCBLD1Q8N8Z6 715 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 CCDC191Q8NCU4 936 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 OR1N1Q8NGS0 311 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 SCAMP5Q8TAC9 235 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 NETO1Q8TDF5 533 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 CSGALNACT1Q8TDX6 532 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 ASB11Q8WXH4 323 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 CFHR4Q92496 578 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 GOLGA1Q92805 767 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 SPSB4Q96A44 273 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 TRAPPC9Q96Q05 1148 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 METTL22Q9BUU2 404 aaPredicted RBP4.3□□□□□ -1.72
PMS1-216ENST00000447734 PCDHAC1Q9H158 963 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 NOD2Q9HC29 1040 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 TLR9Q9NR96 1032 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 USP40Q9NVE5 1235 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 CWC25Q9NXE8 425 aaPredicted RBP4.3□□□□□ -1.72
PMS1-216ENST00000447734 LPAR3Q9UBY5 353 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 MAGEL2Q9UJ55 1249 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 DBR1Q9UK59 544 aaKnown RBP4.3□□□□□ -1.72
PMS1-216ENST00000447734 ZMYND8Q9ULU4 1186 aaPredicted RBP4.3□□□□□ -1.72
PMS1-216ENST00000447734 CNPY2Q9Y2B0 182 aa4.3□□□□□ -1.72
PMS1-216ENST00000447734 RRP7AQ9Y3A4 280 aaKnown RBP4.3□□□□□ -1.72
PMS1-216ENST00000447734 TDRD9Q8NDG6 1382 aaKnown RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 ZC3H12DA2A288 527 aaKnown RBP4.29□□□□□ -1.72
PMS1-216ENST00000447734 MYO1CO00159 1063 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 AP3D1O14617 1153 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 SPTLC2O15270 562 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 KCNQ3O43525 872 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 DNPH1O43598 174 aa4.29□□□□□ -1.72
PMS1-216ENST00000447734 MAFO75444 373 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms