RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 SLC27A2O14975 620 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 RHOBTB1O94844 696 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 GSTT2P0CG29 244 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 GSTT2BP0CG30 244 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 EEF2P13639 858 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 RCVRNP35243 200 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 GRK3P35626 688 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 NFIL3Q16649 462 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TIMM50Q3ZCQ8 353 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SPATS1Q496A3 300 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 GALNTL6Q49A17 601 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TXNDC11Q6PKC3 985 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KYAT3Q6YP21 454 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 ASRGL1Q7L266 308 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PRUNE1Q86TP1 453 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PJA1Q8NG27 643 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 MDM1Q8TC05 714 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 C11orf24Q96F05 449 aaPredicted RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 CEP95Q96GE4 821 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TSNARE1Q96NA8 513 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 NUDT12Q9BQG2 462 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TUBGCP2Q9BSJ2 902 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 C17orf80Q9BSJ5 609 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 CEP44Q9C0F1 390 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 INTS2Q9H0H0 1204 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 ZNF287Q9HBT7 754 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 DCAF16Q9NXF7 216 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 HOXC10Q9NYD6 342 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 DCDC2Q9UHG0 476 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 IP6K2Q9UHH9 426 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PNMA3Q9UL41 463 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SRPRBQ9Y5M8 271 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 MAST3O60307 1309 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 USP32Q8NFA0 1604 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 DIP2AQ14689 1571 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 hCG_2014768A0A024R1R8 64 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KCNK3O14649 394 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 MUSKO15146 869 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 DEXIO95424 95 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 YES1P07947 543 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 FDFT1P37268 417 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KRT17Q04695 432 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 BFSP2Q13515 415 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KIAA1755Q5JYT7 1200 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 AGAP9Q5VTM2 703 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TMEM139Q8IV31 216 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ZNF654Q8IZM8 581 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SIX6OS1Q8N1H7 587 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 USP38Q8NB14 1042 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SHCBP1Q8NEM2 672 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ACAT2Q9BWD1 397 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 GLT8D2Q9H1C3 349 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 IARS2Q9NSE4 1012 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 THAP1Q9NVV9 213 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 NPAP1Q9NZP6 1156 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 WHRNQ9P202 907 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 FAM153AQ9UHL3 310 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 HPSEQ9Y251 543 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 DISP3Q9P2K9 1392 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KIF20BQ96Q89 1820 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ZBBXA8MT70 800 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 RGS13O14921 159 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 MAP3K13O43283 966 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PDE8AO60658 829 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SERPINB7O75635 380 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 CCNE1P24864 410 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 METAP2P50579 478 aaKnown RBP eCLIP3.05□□□□□ -1.92
CHD9-203ENST00000447540 HNRNPDQ14103 355 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 DGUOKQ16854 277 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ACCSLQ4AC99 568 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 RAD9BQ6WBX8 426 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SLC30A10Q6XR72 485 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TPCN2Q8NHX9 752 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SCFD2Q8WU76 684 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 OTULINQ96BN8 352 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TWNKQ96RR1 684 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KLHL31Q9H511 634 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 NHEJ1Q9H9Q4 299 aaPredicted RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 KCNK13Q9HB14 408 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 RPRD1BQ9NQG5 326 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 AASDHPPTQ9NRN7 309 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 MPP6Q9NZW5 540 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SH3D21A4FU49 640 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PHF20L1A8MW92 1017 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 POLR2DO15514 142 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 SNAP91O60641 907 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TRIM3O75382 744 aaPredicted RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 CD4P01730 458 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PIM1P11309 404 aaPredicted RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 RPL22P35268 128 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 ADCK5Q3MIX3 580 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 CAPN12Q6ZSI9 719 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SAPCD2Q86UD0 394 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 C2CD5Q86YS7 1000 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ADGRF2Q8IZF7 708 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 FAM136AQ96C01 138 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 APOPT1Q96IL0 206 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ZC3H12CQ9C0D7 883 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 ARHGEF38Q9NXL2 777 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ING3Q9NXR8 418 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms