RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 DOCK8Q8NF50 2099 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 KIAA1217Q5T5P2 1943 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 BCLAF3A2AJT9 711 aaKnown RBP5.84□□□□□ -1.47
SDCBP-205ENST00000447267 BLACEA4D250 179 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 GREM1O60565 184 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 CFBP00751 764 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 RAC2P15153 192 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 LAG3P18627 525 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 CALML3P27482 149 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 POLR2BP30876 1174 aaKnown RBP5.84□□□□□ -1.47
SDCBP-205ENST00000447267 ALDH7A1P49419 539 aaKnown RBP5.84□□□□□ -1.47
SDCBP-205ENST00000447267 GALK1P51570 392 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 OAZ1P54368 228 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 NFKB2Q00653 900 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 MPP2Q14168 576 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 PLK5Q496M5 336 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 FBXO47Q5MNV8 452 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 C15orf39Q6ZRI6 1047 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 RELL1Q8IUW5 271 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 SRRM1Q8IYB3 904 aaKnown RBP5.84□□□□□ -1.47
SDCBP-205ENST00000447267 LRRC56Q8IYG6 542 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-205ENST00000447267 VPS52Q8N1B4 723 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 FBXO15Q8NCQ5 510 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-205ENST00000447267 ADAMTS14Q8WXS8 1223 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 SMG7Q92540 1137 aaKnown RBP5.84□□□□□ -1.47
SDCBP-205ENST00000447267 CCDC74BQ96LY2 380 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 ZNF558Q96NG5 402 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 NEUROD6Q96NK8 337 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 BRMS1Q9HCU9 246 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 MCM9Q9NXL9 1143 aa5.84□□□□□ -1.47
SDCBP-205ENST00000447267 ADD3Q9UEY8 706 aaKnown RBP5.84□□□□□ -1.47
SDCBP-205ENST00000447267 PTPDC1A2A3K4 754 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 SLC22A31A6NKX4 558 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 TLX3O43711 291 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-205ENST00000447267 CAND2O75155 1236 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 ALDH1L1O75891 902 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 FTH1P19P0C7X4 201 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 SPATA31D3P0C874 917 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 CHRNB1P11230 501 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 KLRC2P26717 231 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 PFKPQ01813 784 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 MGAT3Q09327 533 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 SEMA3BQ13214 749 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 Q6ZS52 159 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 SPATA31D4Q6ZUB0 917 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 SLCO6A1Q86UG4 719 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 SPEM1Q8N4L4 309 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 PDZD8Q8NEN9 1154 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 CCDC120Q96HB5 630 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 ASPNQ9BXN1 380 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 LRRC3Q9BY71 257 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 PLA2G2FQ9BZM2 168 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 GZF1Q9H116 711 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-205ENST00000447267 EPB41L4BQ9H329 900 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 TMX1Q9H3N1 280 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 KANSL2Q9H9L4 492 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 DCP1AQ9NPI6 582 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-205ENST00000447267 ADAMTS1Q9UHI8 967 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 MBD1Q9UIS9 605 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-205ENST00000447267 ISY1Q9ULR0 285 aaKnown RBP5.83□□□□□ -1.48
SDCBP-205ENST00000447267 GREB1Q4ZG55 1949 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 MIA3Q5JRA6 1907 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 KIAA1671Q9BY89 1806 aa5.83□□□□□ -1.48
SDCBP-205ENST00000447267 TTC3P53804 2025 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 FRMPD4Q14CM0 1322 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 NRCAMQ92823 1304 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 CYP2D7A0A087X1C5 515 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 MYOCOSA0A1B0GUC4 107 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 FAM149AA5PLN7 773 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 TMEM232C9JQI7 657 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 NPIPB6E9PJ23 425 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 ETV2O00321 342 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-205ENST00000447267 NFIBO00712 420 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 RGS13O14921 159 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 INPPL1O15357 1258 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 EXTL3O43909 919 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 MGEA5O60502 916 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 DIAPH2O60879 1101 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 TNFRSF8P28908 595 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 HOXC8P31273 242 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 METAP2P50579 478 aaKnown RBP eCLIP5.82□□□□□ -1.48
SDCBP-205ENST00000447267 CLCN4P51793 760 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 NFATC3Q12968 1075 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 MRPL58Q14197 206 aaKnown RBP5.82□□□□□ -1.48
SDCBP-205ENST00000447267 MVPQ14764 893 aaKnown RBP5.82□□□□□ -1.48
SDCBP-205ENST00000447267 TRIP6Q15654 476 aaKnown RBP5.82□□□□□ -1.48
SDCBP-205ENST00000447267 TWISTNBQ3B726 338 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-205ENST00000447267 TKFCQ3LXA3 575 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 ARSHQ5FYA8 562 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 GORABQ5T7V8 394 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 SLC30A10Q6XR72 485 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 TSHZ1Q6ZSZ6 1077 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 TMC3Q7Z5M5 1100 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 SLC39A11Q8N1S5 342 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 ZNF707Q96C28 371 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-205ENST00000447267 ZC3H10Q96K80 434 aaKnown RBP5.82□□□□□ -1.48
SDCBP-205ENST00000447267 PPP1R16BQ96T49 567 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 C16orf70Q9BSU1 422 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 HDAC8Q9BY41 377 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 ZBP1Q9H171 429 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms