RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 BORCS6Q96GS4 357 aa19.66■□□□□ 0.74
COL9A1-205ENST00000447041 FAM84AQ96KN4 292 aa19.66■□□□□ 0.74
COL9A1-205ENST00000447041 SEPT5Q99719 369 aaPredicted RBP19.66■□□□□ 0.74
COL9A1-205ENST00000447041 LPIN3Q9BQK8 851 aa19.66■□□□□ 0.74
COL9A1-205ENST00000447041 TRPV4Q9HBA0 871 aa19.66■□□□□ 0.74
COL9A1-205ENST00000447041 PANK4Q9NVE7 773 aa19.66■□□□□ 0.74
COL9A1-205ENST00000447041 DSEQ9UL01 958 aa19.66■□□□□ 0.74
COL9A1-205ENST00000447041 NUP210Q8TEM1 1887 aaPredicted RBP19.66■□□□□ 0.74
COL9A1-205ENST00000447041 HEPACAM2A8MVW5 462 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 STK38Q15208 465 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 MGAT5BQ3V5L5 792 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 GAREM2Q75VX8 874 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 DNAJB7Q7Z6W7 309 aaPredicted RBP19.65■□□□□ 0.74
COL9A1-205ENST00000447041 METTL23Q86XA0 190 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 LINC00301Q8NCQ3 95 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 KCNG4Q8TDN1 519 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 IRF7Q92985 503 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 CLDN23Q96B33 292 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 ZNF560Q96MR9 790 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 CBWD1Q9BRT8 395 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 MKNK1Q9BUB5 465 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 GPR88Q9GZN0 384 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 RBAKQ9NYW8 714 aaPredicted RBP19.65■□□□□ 0.74
COL9A1-205ENST00000447041 NDRG2Q9UN36 371 aaKnown RBP19.65■□□□□ 0.74
COL9A1-205ENST00000447041 PCDHB13Q9Y5F0 798 aa19.65■□□□□ 0.74
COL9A1-205ENST00000447041 GOLGA8IPA6NC78 632 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 GOLGA8JA6NMD2 632 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 KPNA7A9QM74 516 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 LAMTOR5O43504 91 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 PRPF6O94906 941 aaKnown RBP19.64■□□□□ 0.73
COL9A1-205ENST00000447041 LMNAP02545 664 aaKnown RBP19.64■□□□□ 0.73
COL9A1-205ENST00000447041 ATF6P18850 670 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 GARTP22102 1010 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 GABRR2P28476 465 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 POLR2BP30876 1174 aaKnown RBP19.64■□□□□ 0.73
COL9A1-205ENST00000447041 TFAMQ00059 246 aaKnown RBP19.64■□□□□ 0.73
COL9A1-205ENST00000447041 FZD5Q13467 585 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 SV2CQ496J9 727 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 SCARA3Q6AZY7 606 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 ZC3H14Q6PJT7 736 aaKnown RBP19.64■□□□□ 0.73
COL9A1-205ENST00000447041 LRRTM3Q86VH5 581 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 NT5DC4Q86YG4 428 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 GPIHBP1Q8IV16 184 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 MFSD6LQ8IWD5 586 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 SYCP3Q8IZU3 236 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 GLIS3Q8NEA6 775 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 NOC3LQ8WTT2 800 aaKnown RBP19.64■□□□□ 0.73
COL9A1-205ENST00000447041 HSFX1Q9UBD0 423 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 ASB3Q9Y575 518 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 CACNA1IQ9P0X4 2223 aa19.64■□□□□ 0.73
COL9A1-205ENST00000447041 ARNTLO00327 626 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 ITGB3P05106 788 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 MAGEA9P43362 315 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 ALCAMQ13740 583 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 ZNF687Q8N1G0 1237 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 THEM5Q8N1Q8 247 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 C1orf127Q8N9H9 656 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 FAM200AQ8TCP9 573 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 HPS3Q969F9 1004 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 NELL2Q99435 816 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 ATXN3LQ9H3M9 355 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 SEMA4AQ9H3S1 761 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 PCIF1Q9H4Z3 704 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 TFIP11Q9UBB9 837 aaKnown RBP19.63■□□□□ 0.73
COL9A1-205ENST00000447041 MRPS17Q9Y2R5 130 aaKnown RBP19.63■□□□□ 0.73
COL9A1-205ENST00000447041 PIAS3Q9Y6X2 628 aa19.63■□□□□ 0.73
COL9A1-205ENST00000447041 ZNF263O14978 683 aa19.62■□□□□ 0.73
COL9A1-205ENST00000447041 SPTLC2O15270 562 aa19.62■□□□□ 0.73
COL9A1-205ENST00000447041 NCAM2O15394 837 aa19.62■□□□□ 0.73
COL9A1-205ENST00000447041 LDHAP00338 332 aaKnown RBP19.62■□□□□ 0.73
COL9A1-205ENST00000447041 RPS9P46781 194 aaKnown RBP19.62■□□□□ 0.73
COL9A1-205ENST00000447041 CYP4F8P98187 520 aa19.62■□□□□ 0.73
COL9A1-205ENST00000447041 CSTF1Q05048 431 aaKnown RBP19.62■□□□□ 0.73
COL9A1-205ENST00000447041 E2F4Q16254 413 aa19.62■□□□□ 0.73
COL9A1-205ENST00000447041 GPR158Q5T848 1215 aa19.62■□□□□ 0.73
COL9A1-205ENST00000447041 ITIH5Q86UX2 942 aa19.62■□□□□ 0.73
COL9A1-205ENST00000447041 ARID3BQ8IVW6 561 aaPredicted RBP19.62■□□□□ 0.73
COL9A1-205ENST00000447041 TNMDQ9H2S6 317 aa19.62■□□□□ 0.73
COL9A1-205ENST00000447041 TRPV5Q9NQA5 729 aa19.62■□□□□ 0.73
COL9A1-205ENST00000447041 ABI2Q9NYB9 513 aaPredicted RBP19.62■□□□□ 0.73
COL9A1-205ENST00000447041 FBXO4Q9UKT5 387 aa19.62■□□□□ 0.73
COL9A1-205ENST00000447041 AGAP1Q9UPQ3 857 aa19.62■□□□□ 0.73
COL9A1-205ENST00000447041 MAN2B1O00754 1011 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 EXTL3O43909 919 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 PNPLA4P41247 253 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 TUFMP49411 452 aaKnown RBP19.61■□□□□ 0.73
COL9A1-205ENST00000447041 VEPH1Q14D04 833 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 ZNF528Q3MIS6 628 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 FOXD4L5Q5VV16 416 aaPredicted RBP19.61■□□□□ 0.73
COL9A1-205ENST00000447041 TSSK4Q6SA08 328 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 CCDC65Q8IXS2 484 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 PDCL2Q8N4E4 241 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 CXorf38Q8TB03 319 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 SPPL2BQ8TCT7 592 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 GIPC2Q8TF65 315 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 C2orf15Q8WU43 125 aaKnown RBP19.61■□□□□ 0.73
COL9A1-205ENST00000447041 FOXD4L4Q8WXT5 416 aaPredicted RBP19.61■□□□□ 0.73
COL9A1-205ENST00000447041 FAM3CQ92520 227 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 E2F7Q96AV8 911 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 LRRC3BQ96PB8 259 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms