RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 SMRP1Q8NCR6 262 aa23.59■■□□□ 1.37
APOE-204ENST00000446996 KREMEN2Q8NCW0 462 aa23.59■■□□□ 1.37
APOE-204ENST00000446996 SFXN1Q9H9B4 322 aa23.59■■□□□ 1.37
APOE-204ENST00000446996 FAM50BQ9Y247 325 aa23.59■■□□□ 1.37
APOE-204ENST00000446996 COQ4Q9Y3A0 265 aa23.59■■□□□ 1.37
APOE-204ENST00000446996 ASS1P00966 412 aaKnown RBP23.58■■□□□ 1.37
APOE-204ENST00000446996 HLA-DRAP01903 254 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 ATF2P15336 505 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 MXI1P50539 228 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 TNNC1P63316 161 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 GPR17Q13304 367 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 SMAD4Q13485 552 aaKnown RBP23.58■■□□□ 1.37
APOE-204ENST00000446996 STX1AQ16623 288 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 SOWAHAQ2M3V2 549 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 ZNF699Q32M78 642 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 WDR72Q3MJ13 1102 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 ZNF667Q5HYK9 610 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 TCERG1LQ5VWI1 586 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 CAVIN1Q6NZI2 390 aaKnown RBP23.58■■□□□ 1.37
APOE-204ENST00000446996 GLYCTKQ8IVS8 523 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 TRIM59Q8IWR1 403 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 ENOX1Q8TC92 643 aaKnown RBP23.58■■□□□ 1.37
APOE-204ENST00000446996 ACBD6Q9BR61 282 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 S1PR5Q9H228 398 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 THAP9Q9H5L6 903 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 MAN1C1Q9NR34 630 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 ZDHHC7Q9NXF8 308 aa23.58■■□□□ 1.37
APOE-204ENST00000446996 AFF4Q9UHB7 1163 aaKnown RBP23.58■■□□□ 1.37
APOE-204ENST00000446996 WDR27A2RRH5 827 aa23.57■■□□□ 1.36
APOE-204ENST00000446996 H3BQ06 376 aaPredicted RBP23.57■■□□□ 1.36
APOE-204ENST00000446996 P4HA2O15460 535 aa23.57■■□□□ 1.36
APOE-204ENST00000446996 N4BP1O75113 896 aaKnown RBP23.57■■□□□ 1.36
APOE-204ENST00000446996 P4HA1P13674 534 aa23.57■■□□□ 1.36
APOE-204ENST00000446996 WARSP23381 471 aaKnown RBP23.57■■□□□ 1.36
APOE-204ENST00000446996 HOXA9P31269 272 aa23.57■■□□□ 1.36
APOE-204ENST00000446996 MYL7Q01449 175 aa23.57■■□□□ 1.36
APOE-204ENST00000446996 TPD52L1Q16890 204 aaPredicted RBP23.57■■□□□ 1.36
APOE-204ENST00000446996 CCDC149Q6ZUS6 474 aa23.57■■□□□ 1.36
APOE-204ENST00000446996 FBXL13Q8NEE6 735 aa23.57■■□□□ 1.36
APOE-204ENST00000446996 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.57■■□□□ 1.36
APOE-204ENST00000446996 ASB2Q96Q27 587 aa23.57■■□□□ 1.36
APOE-204ENST00000446996 IMPG2Q9BZV3 1241 aa23.57■■□□□ 1.36
APOE-204ENST00000446996 HSFX1Q9UBD0 423 aa23.57■■□□□ 1.36
APOE-204ENST00000446996 ZMYND10O75800 440 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 POU2F2P09086 479 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 PRKCSHP14314 528 aaPredicted RBP23.56■■□□□ 1.36
APOE-204ENST00000446996 PIK3CAP42336 1068 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 TFF2Q03403 129 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 DCAF17Q5H9S7 520 aaPredicted RBP23.56■■□□□ 1.36
APOE-204ENST00000446996 FAM114A1Q8IWE2 563 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 TCEAL8Q8IYN2 117 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 DCP1BQ8IZD4 617 aaKnown RBP23.56■■□□□ 1.36
APOE-204ENST00000446996 ADGRF2Q8IZF7 708 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 CCDC150Q8NCX0 1101 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 TAS1R2Q8TE23 839 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 RTP3Q9BQQ7 232 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 ZCWPW1Q9H0M4 648 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 ADAM7Q9H2U9 754 aa23.56■■□□□ 1.36
APOE-204ENST00000446996 GRXCR2A6NFK2 248 aa23.55■■□□□ 1.36
APOE-204ENST00000446996 MBTPS2O43462 519 aa23.55■■□□□ 1.36
APOE-204ENST00000446996 HNRNPA1P09651 372 aaKnown RBP eCLIP23.55■■□□□ 1.36
APOE-204ENST00000446996 CPB1P15086 417 aa23.55■■□□□ 1.36
APOE-204ENST00000446996 PCSK1P29120 753 aa23.55■■□□□ 1.36
APOE-204ENST00000446996 ELF1P32519 619 aa23.55■■□□□ 1.36
APOE-204ENST00000446996 LIN9Q5TKA1 542 aa23.55■■□□□ 1.36
APOE-204ENST00000446996 CES5AQ6NT32 575 aa23.55■■□□□ 1.36
APOE-204ENST00000446996 C2orf15Q8WU43 125 aaKnown RBP23.55■■□□□ 1.36
APOE-204ENST00000446996 MMS19Q96T76 1030 aa23.55■■□□□ 1.36
APOE-204ENST00000446996 RAB20Q9NX57 234 aa23.55■■□□□ 1.36
APOE-204ENST00000446996 DDX43Q9NXZ2 648 aaKnown RBP23.55■■□□□ 1.36
APOE-204ENST00000446996 FMO5P49326 533 aa23.54■■□□□ 1.36
APOE-204ENST00000446996 TSPY1Q01534 308 aa23.54■■□□□ 1.36
APOE-204ENST00000446996 CETN1Q12798 172 aa23.54■■□□□ 1.36
APOE-204ENST00000446996 PTCRAQ6ISU1 281 aaPredicted RBP23.54■■□□□ 1.36
APOE-204ENST00000446996 IRF2BP1Q8IU81 584 aa23.54■■□□□ 1.36
APOE-204ENST00000446996 OR10T2Q8NGX3 314 aa23.54■■□□□ 1.36
APOE-204ENST00000446996 KBTBD7Q8WVZ9 684 aa23.54■■□□□ 1.36
APOE-204ENST00000446996 SUSD6Q92537 303 aa23.54■■□□□ 1.36
APOE-204ENST00000446996 FAM124BQ9H5Z6 455 aaPredicted RBP23.54■■□□□ 1.36
APOE-204ENST00000446996 MMRN2Q9H8L6 949 aa23.54■■□□□ 1.36
APOE-204ENST00000446996 NXF1Q9UBU9 619 aaKnown RBP23.54■■□□□ 1.36
APOE-204ENST00000446996 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.54■■□□□ 1.36
APOE-204ENST00000446996 SPATA31D3P0C874 917 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 MTHFRP42898 656 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 ARPP19P56211 112 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 TYRO3Q06418 890 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 SMAD2Q15796 467 aaKnown RBP23.53■■□□□ 1.36
APOE-204ENST00000446996 CBWD6Q4V339 395 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 CBWD3Q5JTY5 395 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 CBWD5Q5RIA9 395 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 SPATA31D4Q6ZUB0 917 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 GPR149Q86SP6 731 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 OSTM1Q86WC4 334 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 CNOT6LQ96LI5 555 aaKnown RBP23.53■■□□□ 1.36
APOE-204ENST00000446996 NECTIN4Q96NY8 510 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 CYP3A43Q9HB55 503 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 CDH9Q9ULB4 789 aa23.53■■□□□ 1.36
APOE-204ENST00000446996 TTC28Q96AY4 2481 aa23.52■■□□□ 1.36
APOE-204ENST00000446996 SPDYE4A6NLX3 237 aa23.52■■□□□ 1.36
APOE-204ENST00000446996 C8AP07357 584 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms