RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TRIM49P0CI25 452 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 TRIM49CP0CI26 452 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 CD44P16070 742 aaKnown RBP15.94■□□□□ 0.14
HDAC4-204ENST00000446876 BMP6P22004 513 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 ACAT1P24752 427 aaKnown RBP15.94■□□□□ 0.14
HDAC4-204ENST00000446876 GBP2P32456 591 aaPredicted RBP15.94■□□□□ 0.14
HDAC4-204ENST00000446876 MYL6P60660 151 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 MYO1EQ12965 1108 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 GPR17Q13304 367 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 ADAM9Q13443 819 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 BIRC3Q13489 604 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 MYBPC2Q14324 1141 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 CAMK4Q16566 473 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 NFIL3Q16649 462 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 CCDC142Q17RM4 750 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 SOWAHAQ2M3V2 549 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 SLC39A12Q504Y0 691 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 C1orf220Q5T0J3 134 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 LRRTM3Q86VH5 581 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 ADGRF2Q8IZF7 708 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 ATAD1Q8NBU5 361 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 MYADMQ96S97 322 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 OXCT2Q9BYC2 517 aaPredicted RBP15.94■□□□□ 0.14
HDAC4-204ENST00000446876 ZCWPW1Q9H0M4 648 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 GDAP2Q9NXN4 497 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 DNMT3BQ9UBC3 853 aaKnown RBP15.94■□□□□ 0.14
HDAC4-204ENST00000446876 SLC27A5Q9Y2P5 690 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 YIPF1Q9Y548 306 aa15.94■□□□□ 0.14
HDAC4-204ENST00000446876 DCXO43602 365 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 PHACTR2O75167 634 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 ASGR2P07307 311 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 CLDN10P78369 228 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 TWF1Q12792 350 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 DUSP4Q13115 394 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 TRPC3Q13507 836 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 COBLL1Q53SF7 1204 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 ANKRD40Q6AI12 368 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 OTOP3Q7RTS5 596 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 FAM186BQ8IYM0 893 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 ADSSL1Q8N142 457 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 THEM5Q8N1Q8 247 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 ST13P5Q8NFI4 369 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-204ENST00000446876 TMLHEQ9NVH6 421 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 LIMD1Q9UGP4 676 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 USTQ9Y2C2 406 aa15.93■□□□□ 0.14
HDAC4-204ENST00000446876 FAM86C2PA6NEL3 165 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 PI4K2BG5E9Z4 385 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 CLSTN1O94985 981 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 VNN1O95497 513 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 C4BPAP04003 597 aaKnown RBP15.92■□□□□ 0.14
HDAC4-204ENST00000446876 POU2F2P09086 479 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 FSHRP23945 695 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 RPL13P26373 211 aaKnown RBP15.92■□□□□ 0.14
HDAC4-204ENST00000446876 VAMP7P51809 220 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 MORC3Q14149 939 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 EDRF1Q3B7T1 1238 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 CENPPQ6IPU0 288 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 KLHL10Q6JEL2 608 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 TOP6BLQ8N6T0 577 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 ITFG1Q8TB96 612 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 TMC2Q8TDI7 906 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 KBTBD7Q8WVZ9 684 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 ING5Q8WYH8 240 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 MMS19Q96T76 1030 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 CORO1BQ9BR76 489 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 XYLT2Q9H1B5 865 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 SMOC2Q9H3U7 446 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 MMRN2Q9H8L6 949 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 DDX43Q9NXZ2 648 aaKnown RBP15.92■□□□□ 0.14
HDAC4-204ENST00000446876 CEP72Q9P209 647 aa15.92■□□□□ 0.14
HDAC4-204ENST00000446876 NRG2O14511 850 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-204ENST00000446876 MAPK13O15264 365 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 RHOP08100 348 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 PSMC2P35998 433 aaKnown RBP15.91■□□□□ 0.14
HDAC4-204ENST00000446876 NCOA4Q13772 614 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 SLC5A9Q2M3M2 681 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 WDR72Q3MJ13 1102 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 PABPC1LQ4VXU2 614 aaKnown RBP15.91■□□□□ 0.14
HDAC4-204ENST00000446876 CLEC17AQ6ZS10 378 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 RTL10Q7L3V2 364 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 LIMS2Q7Z4I7 341 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 ZDHHC14Q8IZN3 488 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 HS6ST3Q8IZP7 471 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 TMEM86AQ8N2M4 240 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 ACSF2Q96CM8 615 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-204ENST00000446876 SEPT5Q99719 369 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-204ENST00000446876 TSG101Q99816 390 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 MRPL45Q9BRJ2 306 aaKnown RBP15.91■□□□□ 0.14
HDAC4-204ENST00000446876 DNAJC25Q9H1X3 360 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.91■□□□□ 0.143e-7■■■■■ 249
HDAC4-204ENST00000446876 ABI2Q9NYB9 513 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-204ENST00000446876 NXF1Q9UBU9 619 aaKnown RBP15.91■□□□□ 0.14
HDAC4-204ENST00000446876 NME7Q9Y5B8 376 aa15.91■□□□□ 0.14
HDAC4-204ENST00000446876 PPP1R3GB7ZBB8 358 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 GABRDO14764 452 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 CETN3O15182 167 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 ATP2C2O75185 946 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 KRT13P13646 458 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 CCNE1P24864 410 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 LMO2P25791 158 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms