RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 UTYO14607 1347 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 AASDHQ4L235 1098 aaPredicted RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 EXOC8Q8IYI6 725 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 BEGAINQ9BUH8 593 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 RABGEF1Q9UJ41 708 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 HNRNPDLO14979 420 aaKnown RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 ST13P50502 369 aaKnown RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 SLC20A1Q8WUM9 679 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 FAM217BQ9NTX9 383 aaPredicted RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 ACTL7BQ9Y614 415 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 C1orf232A0A0U1RR37 186 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 PSTPIP1O43586 416 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 FOXN2P32314 431 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 HORMAD1Q86X24 394 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 NUP93Q8N1F7 819 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 APOL1O14791 398 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 LIN52Q52LA3 116 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 TMEM35BQ8NCS4 154 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 NINJ2Q9NZG7 142 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 ATP5BP06576 529 aaKnown RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 RFX5P48382 616 aaPredicted RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 UBE2SQ16763 222 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 TCHHL1Q5QJ38 904 aaPredicted RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 DUPD1Q68J44 220 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 FBXO11Q86XK2 927 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 NDUFAF2Q8N183 169 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 POU5F2Q8N7G0 328 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 TBC1D16Q8TBP0 767 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 COX4I2Q96KJ9 171 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 EURLQ9NYK6 297 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 GTSE1Q9NYZ3 720 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 PIK3CDO00329 1044 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 ATP10AO60312 1499 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 TCN1P20061 433 aaPredicted RBP8.23□□□□□ -1.09
SMG1-202ENST00000446231 C6orf89Q6UWU4 347 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 CABIN1Q9Y6J0 2220 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 SLC9A2Q9UBY0 812 aa8.23□□□□□ -1.09
SMG1-202ENST00000446231 TAF4O00268 1085 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 PYGMP11217 842 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 FLT3P36888 993 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 NUDT2P50583 147 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 ARHGEF19Q8IW93 802 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 S100A14Q9HCY8 104 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 PALM3A6NDB9 673 aaPredicted RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 GSC2O15499 205 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 KIF19Q2TAC6 998 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 NT5DC3Q86UY8 548 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 PURBQ96QR8 312 aaKnown RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 FIS1Q9Y3D6 152 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 JADE3Q92613 823 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 EIF3EP60228 445 aaKnown RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 ZBTB8BQ8NAP8 495 aaPredicted RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 ANO3Q9BYT9 981 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 IPO11Q9UI26 975 aaKnown RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 SLC12A1Q13621 1099 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 ZBED2Q9BTP6 218 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 ILKAPQ9H0C8 392 aaPredicted RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 ZNF277Q9NRM2 450 aaPredicted RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 PNPLA3Q9NST1 481 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 EMSYQ7Z589 1322 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 H3BNX3 289 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 MECOMQ03112 1051 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 PDCD4Q53EL6 469 aaKnown RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 WDR11Q9BZH6 1224 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 SQORQ9Y6N5 450 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 F8W8V4 182 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 TRIM60Q495X7 471 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMG1-202ENST00000446231 NCLNQ969V3 563 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 DISP1Q96F81 1524 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 TM9SF1O15321 606 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 TSPAN9O75954 239 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 SATL1Q86VE3 508 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 CCNJLQ8IV13 435 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 CCDC60Q8IWA6 550 aaPredicted RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 FITM2Q8N6M3 262 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 MED7O43513 233 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 EIF2S1P05198 315 aaKnown RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 BTDP43251 543 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 NTRK3Q16288 839 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 TMEM63BQ5T3F8 832 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 SETD3Q86TU7 594 aaPredicted RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 BAP1Q92560 729 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 SYBUQ9NX95 663 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 HSPBP1Q9NZL4 362 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 CDK7P50613 346 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 GPATCH4Q5T3I0 446 aaKnown RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 SRPK1Q96SB4 655 aaKnown RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 ARHGEF10LQ9HCE6 1279 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 PARVAQ9NVD7 372 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 BFARQ9NZS9 450 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 FOXN3O00409 490 aaPredicted RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 TDP2O95551 362 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 CCDC130P13994 396 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 PAFAH2Q99487 392 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 TBX22Q9Y458 520 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 TFAMQ00059 246 aaKnown RBP8.22□□□□□ -1.09
SMG1-202ENST00000446231 MROH9Q5TGP6 573 aa8.22□□□□□ -1.09
SMG1-202ENST00000446231 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMG1-202ENST00000446231 KIAA0895Q8NCT3 520 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms