RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 RBP5P82980 135 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 ZCWPW2Q504Y3 356 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 KRT35Q92764 455 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 SH3GL2Q99962 352 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 CENPKQ9BS16 269 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 PCYOX1Q9UHG3 505 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 AGAP1Q9UPQ3 857 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 NOL4O94818 638 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 KRT4P19013 534 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 C1QBPQ07021 282 aaKnown RBP17.47■□□□□ 0.39
TCOF1-206ENST00000445265 METTL23Q86XA0 190 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.47■□□□□ 0.39
TCOF1-206ENST00000445265 EPS8L1Q8TE68 723 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 KIF12Q96FN5 646 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 VCPIP1Q96JH7 1222 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 CGRRF1Q99675 332 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 MANSC1Q9H8J5 431 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 PNMA3Q9UL41 463 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 G3BP2Q9UN86 482 aaKnown RBP17.47■□□□□ 0.39
TCOF1-206ENST00000445265 CTCFP49711 727 aaPredicted RBP17.46■□□□□ 0.39
TCOF1-206ENST00000445265 TATDN2Q93075 761 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 HSD17B14Q9BPX1 270 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 DNAJC18Q9H819 358 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 SLC24A2Q9UI40 661 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 PFDN6O15212 129 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 SMTNL2Q2TAL5 461 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 DACT2Q5SW24 774 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 ABRAQ8N0Z2 381 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 ZNF384Q8TF68 577 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 SMYD3Q9H7B4 428 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 TRIM33Q9UPN9 1127 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 KRT10P13645 584 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 HIPK4Q8NE63 616 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 KLF6Q99612 283 aaPredicted RBP17.46■□□□□ 0.39
TCOF1-206ENST00000445265 TTC1Q99614 292 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 YIPF3Q9GZM5 350 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 MYOZ2Q9NPC6 264 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 NAALADL1Q9UQQ1 740 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 A8MXQ7 604 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 CFLARO15519 480 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 LSM8O95777 96 aaKnown RBP17.46■□□□□ 0.39
TCOF1-206ENST00000445265 EPHB1P54762 984 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 PPP3CAQ08209 521 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 DNAL1Q4LDG9 190 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 RAB44Q7Z6P3 723 aaPredicted RBP17.46■□□□□ 0.39
TCOF1-206ENST00000445265 ACAP3Q96P50 834 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 LRRC4BQ9NT99 713 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 FAM53CQ9NYF3 392 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 TAS2R14Q9NYV8 317 aa17.46■□□□□ 0.39
TCOF1-206ENST00000445265 H3BRJ5 948 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 OGTO15294 1046 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 GAS2O43903 313 aaKnown RBP17.45■□□□□ 0.38
TCOF1-206ENST00000445265 NUDT17P0C025 328 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 ATF7IP2Q5U623 682 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 DUPD1Q68J44 220 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 ACAD11Q709F0 780 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 RSPH3Q86UC2 560 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 CERS5Q8N5B7 392 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 CHST13Q8NET6 341 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 HDAC11Q96DB2 347 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 RXFP1Q9HBX9 757 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 C4orf22Q6V702 233 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 PXMP2Q9NR77 195 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 ZFATQ9P243 1243 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 RASSF10A6NK89 507 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 TULP2O00295 520 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 CLGNO14967 610 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 TGFB1I1O43294 461 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 SHOX2O60902 331 aaPredicted RBP17.45■□□□□ 0.38
TCOF1-206ENST00000445265 STX3Q13277 289 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 MICALL2Q8IY33 904 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 PPWD1Q96BP3 646 aaKnown RBP17.45■□□□□ 0.38
TCOF1-206ENST00000445265 SMARCAD1Q9H4L7 1026 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 ARFGEF2Q9Y6D5 1785 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 MAP4K3Q8IVH8 894 aa17.45■□□□□ 0.38
TCOF1-206ENST00000445265 SUPT20HL2P0C7V6 817 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 EFHC2Q5JST6 749 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 ERMARDQ5T6L9 678 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 CYP4A22Q5TCH4 519 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 FAM71DQ8N9W8 422 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 DDX27Q96GQ7 796 aaKnown RBP17.44■□□□□ 0.38
TCOF1-206ENST00000445265 VPS39Q96JC1 886 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 AP5M1Q9H0R1 490 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 FAM198AQ9UFP1 575 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 DDR1Q08345 913 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 SPOCD1Q6ZMY3 1216 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 FAM83AQ86UY5 434 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 DISP2A7MBM2 1401 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 GPD1P21695 349 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 COG7P83436 770 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 DEUP1Q05D60 604 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 TMEM132DQ14C87 1099 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 RASGEF1CQ8N431 466 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 FGFBP2Q9BYJ0 223 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 SALL4Q9UJQ4 1053 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 SHOC2Q9UQ13 582 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 AFG3L2Q9Y4W6 797 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 CREB3O43889 395 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 SERPINB4P48594 390 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 KLC1Q07866 573 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms