RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 C8AP07357 584 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 EPB41P11171 864 aaKnown RBP25.74■■□□□ 1.71
C9orf3-207ENST00000445181 CD44P16070 742 aaKnown RBP25.74■■□□□ 1.71
C9orf3-207ENST00000445181 BMP6P22004 513 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 CCNE1P24864 410 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 VAMP7P51809 220 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 DLG4P78352 724 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 SIGLEC14Q08ET2 396 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 PPM1LQ5SGD2 360 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 WSCD1Q658N2 575 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 CYP26C1Q6V0L0 522 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 OTOP3Q7RTS5 596 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 BMP8AQ7Z5Y6 402 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 TRIML1Q8N9V2 468 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 SLC7A14Q8TBB6 771 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 PBXIP1Q96AQ6 731 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 ACSF2Q96CM8 615 aaPredicted RBP25.74■■□□□ 1.71
C9orf3-207ENST00000445181 ZDHHC7Q9NXF8 308 aa25.74■■□□□ 1.71
C9orf3-207ENST00000445181 MTCL1Q9Y4B5 1905 aaKnown RBP25.74■■□□□ 1.71
C9orf3-207ENST00000445181 TECTAO75443 2155 aa25.73■■□□□ 1.71
C9orf3-207ENST00000445181 ZMYND10O75800 440 aa25.73■■□□□ 1.71
C9orf3-207ENST00000445181 PMS1P54277 932 aaKnown RBP25.73■■□□□ 1.71
C9orf3-207ENST00000445181 CLDN10P78369 228 aa25.73■■□□□ 1.71
C9orf3-207ENST00000445181 FKBP3Q00688 224 aaKnown RBP25.73■■□□□ 1.71
C9orf3-207ENST00000445181 TPGS2Q68CL5 300 aa25.73■■□□□ 1.71
C9orf3-207ENST00000445181 NELFBQ8WX92 580 aa25.73■■□□□ 1.71
C9orf3-207ENST00000445181 SMG7Q92540 1137 aaKnown RBP25.73■■□□□ 1.71
C9orf3-207ENST00000445181 FAM122AQ96E09 287 aa25.73■■□□□ 1.71
C9orf3-207ENST00000445181 PIDD1Q9HB75 910 aa25.73■■□□□ 1.71
C9orf3-207ENST00000445181 GDAP2Q9NXN4 497 aa25.73■■□□□ 1.71
C9orf3-207ENST00000445181 SORCS3Q9UPU3 1222 aa25.73■■□□□ 1.71
C9orf3-207ENST00000445181 CTNND2Q9UQB3 1225 aa25.73■■□□□ 1.71
C9orf3-207ENST00000445181 PPP1R3GB7ZBB8 358 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 PRRG1O14668 218 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 ABLIM3O94929 683 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 CST3P01034 146 aaPredicted RBP25.72■■□□□ 1.71
C9orf3-207ENST00000445181 ASGR2P07307 311 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 OR4Q2P0C623 313 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 PLA2G5P39877 138 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 TDRD10Q5VZ19 366 aaKnown RBP25.72■■□□□ 1.71
C9orf3-207ENST00000445181 PDCL2Q8N4E4 241 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 MKNK1Q9BUB5 465 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 RHOBTB2Q9BYZ6 727 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 CYP4F11Q9HBI6 524 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 L1RE1Q9UN81 338 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 TRIOO75962 3097 aa25.72■■□□□ 1.71
C9orf3-207ENST00000445181 BICDL2A1A5D9 508 aa25.71■■□□□ 1.71
C9orf3-207ENST00000445181 IKBKBO14920 756 aa25.71■■□□□ 1.71
C9orf3-207ENST00000445181 ATF2P15336 505 aa25.71■■□□□ 1.71
C9orf3-207ENST00000445181 ADCY1Q08828 1119 aa25.71■■□□□ 1.71
C9orf3-207ENST00000445181 UVSSAQ2YD98 709 aa25.71■■□□□ 1.71
C9orf3-207ENST00000445181 TOP6BLQ8N6T0 577 aa25.71■■□□□ 1.71
C9orf3-207ENST00000445181 ZNF707Q96C28 371 aaPredicted RBP25.71■■□□□ 1.71
C9orf3-207ENST00000445181 MMS19Q96T76 1030 aa25.71■■□□□ 1.71
C9orf3-207ENST00000445181 PRKD2Q9BZL6 878 aa25.71■■□□□ 1.71
C9orf3-207ENST00000445181 WDR6Q9NNW5 1121 aaKnown RBP25.71■■□□□ 1.71
C9orf3-207ENST00000445181 AFF4Q9UHB7 1163 aaKnown RBP25.71■■□□□ 1.71
C9orf3-207ENST00000445181 TSC2P49815 1807 aa25.7■■□□□ 1.71
C9orf3-207ENST00000445181 SLC16A3O15427 465 aaKnown RBP25.7■■□□□ 1.7
C9orf3-207ENST00000445181 HNRNPA1P09651 372 aaKnown RBP eCLIP25.7■■□□□ 1.7
C9orf3-207ENST00000445181 TRIM49P0CI25 452 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 TRIM49CP0CI26 452 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 MYL6P60660 151 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 PAK1Q13153 545 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 MTMR3Q13615 1198 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 NCOA4Q13772 614 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 RNF19BQ6ZMZ0 732 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 UBALD2Q8IYN6 164 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 TMEM86AQ8N2M4 240 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 SYAP1Q96A49 352 aaPredicted RBP25.7■■□□□ 1.7
C9orf3-207ENST00000445181 ASIC4Q96FT7 647 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 PGLYRP2Q96PD5 576 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 MMRN2Q9H8L6 949 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 POLIQ9UNA4 740 aa25.7■■□□□ 1.7
C9orf3-207ENST00000445181 C2orf16Q68DN1 1984 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 DENND4AQ7Z401 1863 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 CCL16O15467 120 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 XYLBO75191 536 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 PAPLNO95428 1278 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 C4BPAP04003 597 aaKnown RBP25.69■■□□□ 1.7
C9orf3-207ENST00000445181 ATICP31939 592 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 TNNC1P63316 161 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 GPR17Q13304 367 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 WDR72Q3MJ13 1102 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 RTL10Q7L3V2 364 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 ADGRF2Q8IZF7 708 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 OR10T2Q8NGX3 314 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 GPT2Q8TD30 523 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 TMEM209Q96SK2 561 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 MAFFQ9ULX9 164 aa25.69■■□□□ 1.7
C9orf3-207ENST00000445181 CLUHO75153 1309 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 LRG1P02750 347 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 GCLMP48507 274 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 STX17P56962 302 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 MYL7Q01449 175 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 TSPY1Q01534 308 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 ENPEPQ07075 957 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 SOWAHAQ2M3V2 549 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 ZNF699Q32M78 642 aa25.68■■□□□ 1.7
C9orf3-207ENST00000445181 SLC39A12Q504Y0 691 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms