RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 MBD3O95983 291 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 C4BPAP04003 597 aaKnown RBP18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 OR4Q2P0C623 313 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 TRIM49P0CI25 452 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 TRIM49CP0CI26 452 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 HOXA9P31269 272 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 ATICP31939 592 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 TNNC1P63316 161 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 MYL7Q01449 175 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 ADCY1Q08828 1119 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 PAK1Q13153 545 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 GPR17Q13304 367 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 NCOA4Q13772 614 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 DPH6Q7L8W6 267 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 ZC3H3Q8IXZ2 948 aaKnown RBP18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 ADGRF2Q8IZF7 708 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 SPATA18Q8TC71 538 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 GPT2Q8TD30 523 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 CEP63Q96MT8 703 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 NECAB3Q96P71 396 aaPredicted RBP18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 MMS19Q96T76 1030 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 COL25A1Q9BXS0 654 aaPredicted RBP18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 RHOBTB2Q9BYZ6 727 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 CYP4F11Q9HBI6 524 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 CDH22Q9UJ99 828 aa18.74■□□□□ 0.59
SMARCAL1-209ENST00000444508 STAU1O95793 577 aaKnown RBP18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 SSTR3P32745 418 aaPredicted RBP18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 LHX1P48742 406 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 MYL6P60660 151 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 TSPY1Q01534 308 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 ZP2Q05996 745 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 ZNF699Q32M78 642 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 WDR72Q3MJ13 1102 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 ZACNQ401N2 412 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 FOXR2Q6PJQ5 311 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 RNF19BQ6ZMZ0 732 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 SV2AQ7L0J3 742 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 TCEAL8Q8IYN2 117 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 OR10T2Q8NGX3 314 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 ZNF707Q96C28 371 aaPredicted RBP18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 POMKQ9H5K3 350 aa18.73■□□□□ 0.59
SMARCAL1-209ENST00000444508 C5orf42Q9H799 3197 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 PAPLNO95428 1278 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 LRG1P02750 347 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 GTF2H1P32780 548 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 PIK3CAP42336 1068 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 GCLMP48507 274 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 STX17P56962 302 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 SOWAHAQ2M3V2 549 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 C1orf220Q5T0J3 134 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 TTI2Q6NXR4 508 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 DCP1BQ8IZD4 617 aaKnown RBP18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 MLKLQ8NB16 471 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 PGLYRP2Q96PD5 576 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 RTP3Q9BQQ7 232 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 ZCWPW1Q9H0M4 648 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 MMRN2Q9H8L6 949 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 METTL14Q9HCE5 456 aaKnown RBP18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 DDX43Q9NXZ2 648 aaKnown RBP18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 NXF1Q9UBU9 619 aaKnown RBP18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 ARMCX3Q9UH62 379 aaPredicted RBP18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 POLIQ9UNA4 740 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 C2orf16Q68DN1 1984 aa18.72■□□□□ 0.59
SMARCAL1-209ENST00000444508 CCL16O15467 120 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 SEC24AO95486 1093 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 VNN1O95497 513 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 PCSK1P29120 753 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 PPP3CAQ08209 521 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 SMARCB1Q12824 385 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 SGSM1Q2NKQ1 1148 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 CCDC40Q4G0X9 1142 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 SLC39A12Q504Y0 691 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 DCAF17Q5H9S7 520 aaPredicted RBP18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 ZNF667Q5HYK9 610 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 TCERG1LQ5VWI1 586 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 GJD3Q8N144 294 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 TAF4BQ92750 862 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 RPGRIP1Q96KN7 1286 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 TMEM209Q96SK2 561 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 DUSP9Q99956 384 aaKnown RBP18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 ACBD6Q9BR61 282 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 IMPG2Q9BZV3 1241 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 XYLT2Q9H1B5 865 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 VRTNQ9H8Y1 702 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 TMEM8AQ9HCN3 771 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 NR2E1Q9Y466 385 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 INSL5Q9Y5Q6 135 aa18.71■□□□□ 0.59
SMARCAL1-209ENST00000444508 MTMR11A4FU01 709 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 FGFR1OPO95684 399 aaKnown RBP18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 HLA-DRAP01903 254 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 POU2F2P09086 479 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 P4HA1P13674 534 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 MCCD1P59942 119 aaPredicted RBP18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 KRT39Q6A163 491 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 LIMS2Q7Z4I7 341 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 FILIP1Q7Z7B0 1213 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 CCDC150Q8NCX0 1101 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 FEZF2Q8TBJ5 459 aa18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 C2orf15Q8WU43 125 aaKnown RBP18.7■□□□□ 0.58
SMARCAL1-209ENST00000444508 SNX25Q9H3E2 840 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms