RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 AOC1P19801 751 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 CLCN5P51795 746 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 EPHA5P54756 1037 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 TFAMQ00059 246 aaKnown RBP11.74□□□□□ -0.53
SF3A1-203ENST00000444440 MYBPC2Q14324 1141 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 SLC39A12Q504Y0 691 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 STXBP5Q5T5C0 1151 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 ATL3Q6DD88 541 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 UNC13DQ70J99 1090 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 USP37Q86T82 979 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 OSTM1Q86WC4 334 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 NELFCDQ8IXH7 590 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 GPD1LQ8N335 351 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 STKLD1Q8NE28 680 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 OR5B17Q8NGF7 314 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 SHKBP1Q8TBC3 707 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 LEO1Q8WVC0 666 aaPredicted RBP11.74□□□□□ -0.53
SF3A1-203ENST00000444440 ZCWPW1Q9H0M4 648 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 GZF1Q9H116 711 aaPredicted RBP11.74□□□□□ -0.53
SF3A1-203ENST00000444440 TMLHEQ9NVH6 421 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 HSPBP1Q9NZL4 362 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 L1RE1Q9UN81 338 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 AGAP1Q9UPQ3 857 aa11.74□□□□□ -0.53
SF3A1-203ENST00000444440 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.74□□□□□ -0.53
SF3A1-203ENST00000444440 A0A1B0GVL5 298 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 SHISA7A6NL88 538 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 KPNA7A9QM74 516 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 EIF3DO15371 548 aaKnown RBP eCLIP11.73□□□□□ -0.53
SF3A1-203ENST00000444440 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
SF3A1-203ENST00000444440 MYL4P12829 197 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 PFKFB1P16118 471 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 ATF6P18850 670 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 MRE11P49959 708 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 PTPN5P54829 565 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 TEAD2Q15562 447 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 FAM78AQ5JUQ0 283 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 MTSS1LQ765P7 747 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 PDCL2Q8N4E4 241 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 RSPRY1Q96DX4 576 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 LPIN3Q9BQK8 851 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 MKNK1Q9BUB5 465 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 FOXQ1Q9C009 403 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 TMEM206Q9H813 350 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 TBC1D17Q9HA65 648 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 SLC39A2Q9NP94 309 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 ARHGEF3Q9NR81 526 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 AGPAT3Q9NRZ7 376 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 CFAP45Q9UL16 551 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 HPSEQ9Y251 543 aa11.73□□□□□ -0.53
SF3A1-203ENST00000444440 DCHS1Q96JQ0 3298 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 LDHAP00338 332 aaKnown RBP11.72□□□□□ -0.53
SF3A1-203ENST00000444440 DCNP07585 359 aaKnown RBP11.72□□□□□ -0.53
SF3A1-203ENST00000444440 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 GLULP15104 373 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 GPR15P49685 360 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 GRM2Q14416 872 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 SV2CQ496J9 727 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 GAREM2Q75VX8 874 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 PDZD4Q76G19 769 aaPredicted RBP11.72□□□□□ -0.53
SF3A1-203ENST00000444440 NT5DC4Q86YG4 428 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 GPIHBP1Q8IV16 184 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 CSGALNACT2Q8N6G5 542 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 RDH13Q8NBN7 331 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 KIAA0895Q8NCT3 520 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 PLEKHO2Q8TD55 490 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 PAGE5Q96GU1 130 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 ZNF512Q96ME7 567 aaPredicted RBP11.72□□□□□ -0.53
SF3A1-203ENST00000444440 ZNF560Q96MR9 790 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 ASB16Q96NS5 453 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 GOLPH3LQ9H4A5 285 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 MAGEF1Q9HAY2 307 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 INTS13Q9NVM9 706 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 FAM13BQ9NYF5 915 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 DLGAP2Q9P1A6 1054 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 MAFFQ9ULX9 164 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 MTF2Q9Y483 593 aaPredicted RBP11.72□□□□□ -0.53
SF3A1-203ENST00000444440 MYOFQ9NZM1 2061 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 EML5Q05BV3 1969 aa11.72□□□□□ -0.53
SF3A1-203ENST00000444440 A0A1W2PRU2 124 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 ECI2O75521 394 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 KRT19P08727 400 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 SLFN14P0C7P3 912 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 CD72P21854 359 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 ACAT1P24752 427 aaKnown RBP11.71□□□□□ -0.53
SF3A1-203ENST00000444440 VIPR2P41587 438 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 CYP2J2P51589 502 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 AMPD3Q01432 767 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 BFSP1Q12934 665 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 STK4Q13043 487 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 SNW1Q13573 536 aaKnown RBP11.71□□□□□ -0.53
SF3A1-203ENST00000444440 BMT2Q1RMZ1 405 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 VITQ6UXI7 678 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 CCDC105Q8IYK2 499 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 ELSPBP1Q96BH3 223 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 PKMYT1Q99640 499 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 SEPT5Q99719 369 aaPredicted RBP11.71□□□□□ -0.53
SF3A1-203ENST00000444440 OXCT2Q9BYC2 517 aaPredicted RBP11.71□□□□□ -0.53
SF3A1-203ENST00000444440 LRRC27Q9C0I9 530 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 IL21Q9HBE4 155 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 GDPD2Q9HCC8 539 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms