RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 CCDC127Q96BQ5 260 aa13.49□□□□□ -0.25
CDCA4P3-201ENST00000442572 HPDLQ96IR7 371 aa13.49□□□□□ -0.25
CDCA4P3-201ENST00000442572 MKNK1Q9BUB5 465 aa13.49□□□□□ -0.25
CDCA4P3-201ENST00000442572 TSHZ2Q9NRE2 1034 aa13.49□□□□□ -0.25
CDCA4P3-201ENST00000442572 IGSF9Q9P2J2 1179 aa13.49□□□□□ -0.25
CDCA4P3-201ENST00000442572 EPS15L1Q9UBC2 864 aa13.49□□□□□ -0.25
CDCA4P3-201ENST00000442572 PCDHA5Q9Y5H7 936 aa13.49□□□□□ -0.25
CDCA4P3-201ENST00000442572 CCL16O15467 120 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 MICAL2O94851 1124 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 PTPN2P17706 415 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 FSHRP23945 695 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 PCSK1P29120 753 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 TUFMP49411 452 aaKnown RBP13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 MYL7Q01449 175 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 TSPY1Q01534 308 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 STIM1Q13586 685 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 NFE2Q16621 373 aaPredicted RBP13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 WSCD1Q658N2 575 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 LMBRD2Q68DH5 695 aaPredicted RBP13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 CENPPQ6IPU0 288 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 FOXR2Q6PJQ5 311 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 RNF19BQ6ZMZ0 732 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 INTS8Q75QN2 995 aaKnown RBP13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 GRASPQ7Z6J2 395 aaPredicted RBP13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 UBALD2Q8IYN6 164 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 PDCL2Q8N4E4 241 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 SPPL2BQ8TCT7 592 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 EDAQ92838 391 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 KHSRPQ92945 711 aaKnown RBP eCLIP13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 ACBD6Q9BR61 282 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 ZCWPW1Q9H0M4 648 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 GZF1Q9H116 711 aaPredicted RBP13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 VRTNQ9H8Y1 702 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 L1RE1Q9UN81 338 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 SORCS3Q9UPU3 1222 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 ASB3Q9Y575 518 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 SNX9Q9Y5X1 595 aa13.48□□□□□ -0.25
CDCA4P3-201ENST00000442572 GREB1Q4ZG55 1949 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 NUP210Q8TEM1 1887 aaPredicted RBP13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 MTMR11A4FU01 709 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 ZNF197O14709 1029 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 GABRDO14764 452 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 GADD45BO75293 160 aaPredicted RBP13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 SEC24AO95486 1093 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 GBP2P32456 591 aaPredicted RBP13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 PSMC2P35998 433 aaKnown RBP13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 ALDH1A3P47895 512 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 ZXDAP98168 799 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 LRRC63Q05C16 580 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 ADAM9Q13443 819 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 TRPC3Q13507 836 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 PABPC1LQ4VXU2 614 aaKnown RBP13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 CEP135Q66GS9 1140 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 IQCEQ6IPM2 695 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 OR10T2Q8NGX3 314 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 ZNF516Q92618 1163 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 SYAP1Q96A49 352 aaPredicted RBP13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 ZNF512Q96ME7 567 aaPredicted RBP13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 TSG101Q99816 390 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 RTP3Q9BQQ7 232 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 EPHX3Q9H6B9 360 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 MUTYHQ9UIF7 546 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 POLIQ9UNA4 740 aa13.47□□□□□ -0.25
CDCA4P3-201ENST00000442572 OBSL1O75147 1896 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 ZNF638Q14966 1978 aaKnown RBP13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 LRRIQ3A6PVS8 624 aaPredicted RBP13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 CETN3O15182 167 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 PHACTR2O75167 634 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 TACC1O75410 805 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 VNN2O95498 520 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 C4BPAP04003 597 aaKnown RBP13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 RHOP08100 348 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 LAMP2P13473 410 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 KRT13P13646 458 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 PRCPP42785 496 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 CASP4P49662 377 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 EPHB3P54753 998 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 EPHA5P54756 1037 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 FKBP3Q00688 224 aaKnown RBP13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 DUSP4Q13115 394 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 MTMR3Q13615 1198 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 SOWAHAQ2M3V2 549 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 ZACNQ401N2 412 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 TMEM31Q5JXX7 168 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 ADGRF2Q8IZF7 708 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 TRIML1Q8N9V2 468 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 FEZF2Q8TBJ5 459 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 PLEKHO2Q8TD55 490 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 TAF4BQ92750 862 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 DHTKD1Q96HY7 919 aaPredicted RBP13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 ABCB6Q9NP58 842 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 DDX43Q9NXZ2 648 aaKnown RBP13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 GDE1Q9NZC3 331 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 DNMT3BQ9UBC3 853 aaKnown RBP13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 CDH7Q9ULB5 785 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 MAPK8IP1Q9UQF2 711 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 YIPF1Q9Y548 306 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 TECTAO75443 2155 aa13.46□□□□□ -0.25
CDCA4P3-201ENST00000442572 MYH10P35580 1976 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms