RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 CTSHP09668 335 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 PFKFB1P16118 471 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ATP2B4P23634 1241 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 EPHB2P29323 1055 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 SLC1A1P43005 524 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 MRPS15P82914 257 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 TFAP4Q01664 338 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 GFPT1Q06210 699 aaPredicted RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 SLC34A1Q06495 639 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 MTMR2Q13614 643 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 LRRC14Q15048 493 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 LRRC36Q1X8D7 754 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 LRRC24Q50LG9 513 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 C9orf50Q5SZB4 431 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 PCNX4Q63HM2 1172 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 DCAF15Q66K64 600 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 DENND2CQ68D51 928 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ELMSAN1Q6PJG2 1045 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 LRIG3Q6UXM1 1119 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 RFX8Q6ZV50 586 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 TMTC3Q6ZXV5 915 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 VASH1Q7L8A9 365 aaPredicted RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 APOBEC3FQ8IUX4 373 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 NUDCD3Q8IVD9 361 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ALDH16A1Q8IZ83 802 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 IQCKQ8N0W5 287 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 FMR1NBQ8N0W7 255 aaPredicted RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 LINC00469Q8N7U9 141 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 C8orf58Q8NAV2 365 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 APPL2Q8NEU8 664 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 OR7G1Q8NGA0 311 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 PPP1R14CQ8TAE6 165 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 GPKOWQ92917 476 aaPredicted RBP eCLIP2.92□□□□□ -1.94
LIG4-203ENST00000442234 NLRP4Q96MN2 994 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 TMEM237Q96Q45 408 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 LRRC37BQ96QE4 947 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 MTMR9Q96QG7 549 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 UHRF1Q96T88 793 aaPredicted RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 PLIN2Q99541 437 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 CALN1Q9BXU9 219 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 TRIM31Q9BZY9 425 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ZHX3Q9H4I2 956 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ATP13A3Q9H7F0 1226 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 NEK6Q9HC98 313 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 TYW1Q9NV66 732 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 HOXC10Q9NYD6 342 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 TLR7Q9NYK1 1049 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 NKIRAS1Q9NYS0 192 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 GMIPQ9P107 970 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 PCSK1NQ9UHG2 260 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 HAO1Q9UJM8 370 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 MINPP1Q9UNW1 487 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 UTP11Q9Y3A2 253 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 MAD1L1Q9Y6D9 718 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ADGRB1O14514 1584 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 EDC4Q6P2E9 1401 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 LRRIQ4A6NIV6 560 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 RSPH10B2B2RC85 870 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 KMOO15229 486 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 TEX33O43247 280 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 MAN1A2O60476 641 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 PDE8AO60658 829 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ICMTO60725 284 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 SERPINI2O75830 405 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 DGKIO75912 1065 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ZIC2O95409 532 aaPredicted RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 GJB1P08034 283 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 FAM153BP0C7A2 387 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 RSPH10BP0C881 870 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 CETPP11597 493 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 PCNAP12004 261 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 COL6A2P12110 1019 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 LRPAP1P30533 357 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 KRT2P35908 639 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 CLK3P49761 638 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 BCAP31P51572 246 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 AMPD2Q01433 879 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 TRIM14Q14142 442 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 GNA13Q14344 377 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 KRT81Q14533 505 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 GRIK5Q16478 980 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 GRAMD1BQ3KR37 738 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ADCK5Q3MIX3 580 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 FAM153CQ494X1 144 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 MMEL1Q495T6 779 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 SGO2Q562F6 1265 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 CMPK2Q5EBM0 449 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 SIGIRRQ6IA17 410 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ALKBH2Q6NS38 261 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 PPP4R4Q6NUP7 873 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 FASTKD5Q7L8L6 764 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 DGLUCYQ7Z3D6 616 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 RETREG3Q86VR2 466 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 GALNT4Q8N4A0 578 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 FAM13CQ8NE31 585 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 CDC26Q8NHZ8 85 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 GIMAP1Q8WWP7 306 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 IRGQQ8WZA9 623 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 HPS1Q92902 700 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 PMEPA1Q969W9 287 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms