RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 C1orf127Q8N9H9 656 aa18.15■□□□□ 0.5
COL16A1-204ENST00000440437 GLIS3Q8NEA6 775 aa18.15■□□□□ 0.5
COL16A1-204ENST00000440437 CXorf38Q8TB03 319 aa18.15■□□□□ 0.5
COL16A1-204ENST00000440437 ZSCAN18Q8TBC5 510 aaPredicted RBP18.15■□□□□ 0.5
COL16A1-204ENST00000440437 NKD2Q969F2 451 aaPredicted RBP18.15■□□□□ 0.5
COL16A1-204ENST00000440437 PSMG2Q969U7 264 aa18.15■□□□□ 0.5
COL16A1-204ENST00000440437 ZNF560Q96MR9 790 aa18.15■□□□□ 0.5
COL16A1-204ENST00000440437 TRIM9Q9C026 710 aa18.15■□□□□ 0.5
COL16A1-204ENST00000440437 CUEDC2Q9H467 287 aa18.15■□□□□ 0.5
COL16A1-204ENST00000440437 TMEM206Q9H813 350 aa18.15■□□□□ 0.5
COL16A1-204ENST00000440437 ZNF334Q9HCZ1 680 aaPredicted RBP18.15■□□□□ 0.5
COL16A1-204ENST00000440437 HEBP1Q9NRV9 189 aa18.15■□□□□ 0.5
COL16A1-204ENST00000440437 RBAKQ9NYW8 714 aaPredicted RBP18.15■□□□□ 0.5
COL16A1-204ENST00000440437 ASB3Q9Y575 518 aa18.15■□□□□ 0.5
COL16A1-204ENST00000440437 CFAP54Q96N23 3096 aa18.15■□□□□ 0.5
COL16A1-204ENST00000440437 A0A1W2PRU2 124 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 KPNA7A9QM74 516 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 EXTL3O43909 919 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 CUTAO60888 179 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 SOAT2O75908 522 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 CD72P21854 359 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 UBXN2BQ14CS0 331 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 SHC4Q6S5L8 630 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 METTL23Q86XA0 190 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 SYCP3Q8IZU3 236 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 DEPDC1BQ8WUY9 529 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 MKNK1Q9BUB5 465 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 TRMT61BQ9BVS5 477 aaKnown RBP18.14■□□□□ 0.49
COL16A1-204ENST00000440437 GPR88Q9GZN0 384 aa18.14■□□□□ 0.49
COL16A1-204ENST00000440437 GOLGA8IPA6NC78 632 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 GOLGA8JA6NMD2 632 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 ITGB3P05106 788 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 PSMC3P17980 439 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 ATF6P18850 670 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 TARSP26639 723 aaKnown RBP18.13■□□□□ 0.49
COL16A1-204ENST00000440437 POLR2BP30876 1174 aaKnown RBP18.13■□□□□ 0.49
COL16A1-204ENST00000440437 PNPLA4P41247 253 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 VIPR2P41587 438 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 TFAMQ00059 246 aaKnown RBP18.13■□□□□ 0.49
COL16A1-204ENST00000440437 STXBP5Q5T5C0 1151 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 SCARA3Q6AZY7 606 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 CNNM4Q6P4Q7 775 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 GAREM2Q75VX8 874 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 DNAJB7Q7Z6W7 309 aaPredicted RBP18.13■□□□□ 0.49
COL16A1-204ENST00000440437 LRRTM3Q86VH5 581 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 HSCBQ8IWL3 235 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 MAML2Q8IZL2 1156 aaPredicted RBP18.13■□□□□ 0.49
COL16A1-204ENST00000440437 GPD1LQ8N335 351 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 HPS3Q969F9 1004 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 FAM84AQ96KN4 292 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 LRRC27Q9C0I9 530 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 PCIF1Q9H4Z3 704 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 BRD9Q9H8M2 597 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 TRPV5Q9NQA5 729 aa18.13■□□□□ 0.49
COL16A1-204ENST00000440437 FAM170BA6NMN3 283 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 KIAA0391O15091 583 aaKnown RBP18.12■□□□□ 0.49
COL16A1-204ENST00000440437 F13A1P00488 732 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 SP9P0CG40 484 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 ZSCAN22P10073 491 aaPredicted RBP18.12■□□□□ 0.49
COL16A1-204ENST00000440437 MAGEA9P43362 315 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 SMARCB1Q12824 385 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 FOXD4L5Q5VV16 416 aaPredicted RBP18.12■□□□□ 0.49
COL16A1-204ENST00000440437 ITIH5Q86UX2 942 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 MFSD6LQ8IWD5 586 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 THEM5Q8N1Q8 247 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 SPPL2BQ8TCT7 592 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 C2orf15Q8WU43 125 aaKnown RBP18.12■□□□□ 0.49
COL16A1-204ENST00000440437 FOXD4L4Q8WXT5 416 aaPredicted RBP18.12■□□□□ 0.49
COL16A1-204ENST00000440437 IRF7Q92985 503 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 CLDN23Q96B33 292 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 DHX58Q96C10 678 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 RSPRY1Q96DX4 576 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 SEPT5Q99719 369 aaPredicted RBP18.12■□□□□ 0.49
COL16A1-204ENST00000440437 LPIN3Q9BQK8 851 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 BCO2Q9BYV7 579 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 SLITRK6Q9H5Y7 841 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 PDE11AQ9HCR9 933 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 ITGA11Q9UKX5 1188 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 AGAP1Q9UPQ3 857 aa18.12■□□□□ 0.49
COL16A1-204ENST00000440437 PTPRDP23468 1912 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 ZNF638Q14966 1978 aaKnown RBP18.11■□□□□ 0.49
COL16A1-204ENST00000440437 HEPACAM2A8MVW5 462 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 ARNTLO00327 626 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 EIF3DO15371 548 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL16A1-204ENST00000440437 PDIA4P13667 645 aaKnown RBP18.11■□□□□ 0.49
COL16A1-204ENST00000440437 GABRR2P28476 465 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 GDI1P31150 447 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 HOXD13P35453 343 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 TUFMP49411 452 aaKnown RBP18.11■□□□□ 0.49
COL16A1-204ENST00000440437 CDR1P51861 262 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 FZD5Q13467 585 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 MGAT5BQ3V5L5 792 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 ZNF852Q6ZMS4 543 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 STXBP4Q6ZWJ1 553 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 EPM2AIP1Q7L775 607 aaPredicted RBP18.11■□□□□ 0.49
COL16A1-204ENST00000440437 ZNF687Q8N1G0 1237 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 LRRC52Q8N7C0 313 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 IQUBQ8NA54 791 aa18.11■□□□□ 0.49
COL16A1-204ENST00000440437 CACTINQ8WUQ7 758 aaKnown RBP18.11■□□□□ 0.49
COL16A1-204ENST00000440437 E2F7Q96AV8 911 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms