RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 NARSO43776 548 aaKnown RBP14.78□□□□□ -0.04
LTBR-202ENST00000440421 HUS1O60921 280 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 SOAT2O75908 522 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 RHOBTB3O94955 611 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 CASP4P49662 377 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 SLC5A9Q2M3M2 681 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 IQCEQ6IPM2 695 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 CENPPQ6IPU0 288 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 NPAS3Q8IXF0 933 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 HS6ST3Q8IZP7 471 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 FMR1NBQ8N0W7 255 aaPredicted RBP14.78□□□□□ -0.04
LTBR-202ENST00000440421 PDCL2Q8N4E4 241 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 HPDLQ96IR7 371 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 ZNF512Q96ME7 567 aaPredicted RBP14.78□□□□□ -0.04
LTBR-202ENST00000440421 CGRRF1Q99675 332 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 ZCWPW1Q9H0M4 648 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 L1RE1Q9UN81 338 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 NOTCH4Q99466 2003 aa14.78□□□□□ -0.04
LTBR-202ENST00000440421 PDXKO00764 312 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 PDGFBP01127 241 aaPredicted RBP14.77□□□□□ -0.05
LTBR-202ENST00000440421 NR3C1P04150 777 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 MYL4P12829 197 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 CEBPBP17676 345 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 ALDH1A3P47895 512 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 MYO1EQ12965 1108 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 PNOCQ13519 176 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 HTR4Q13639 388 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 PARM1Q6UWI2 310 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 PDZD4Q76G19 769 aaPredicted RBP14.77□□□□□ -0.05
LTBR-202ENST00000440421 TRAPPC11Q7Z392 1133 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 LRRTM3Q86VH5 581 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 SLC44A3Q8N4M1 653 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 ZNF516Q92618 1163 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 TCEAL4Q96EI5 215 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 MCRS1Q96EZ8 462 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 CCDC34Q96HJ3 373 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 MFSD14AQ96MC6 490 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 SEPT5Q99719 369 aaPredicted RBP14.77□□□□□ -0.05
LTBR-202ENST00000440421 GZF1Q9H116 711 aaPredicted RBP14.77□□□□□ -0.05
LTBR-202ENST00000440421 GDAP2Q9NXN4 497 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 DDX43Q9NXZ2 648 aaKnown RBP14.77□□□□□ -0.05
LTBR-202ENST00000440421 DUSP12Q9UNI6 340 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 HCN4Q9Y3Q4 1203 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 ZFP37Q9Y6Q3 630 aaPredicted RBP14.77□□□□□ -0.05
LTBR-202ENST00000440421 NUMBLQ9Y6R0 609 aa14.77□□□□□ -0.05
LTBR-202ENST00000440421 ANHXE9PGG2 379 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 NRG2O14511 850 aaPredicted RBP14.76□□□□□ -0.05
LTBR-202ENST00000440421 PRPF40AO75400 957 aaKnown RBP14.76□□□□□ -0.05
LTBR-202ENST00000440421 CST3P01034 146 aaPredicted RBP14.76□□□□□ -0.05
LTBR-202ENST00000440421 ACAT1P24752 427 aaKnown RBP14.76□□□□□ -0.05
LTBR-202ENST00000440421 CCR2P41597 374 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 EPHB3P54753 998 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 TSPY1Q01534 308 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 FAM160A1Q05DH4 1040 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 PLD1Q13393 1074 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 SNW1Q13573 536 aaKnown RBP14.76□□□□□ -0.05
LTBR-202ENST00000440421 KCNB1Q14721 858 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 SOWAHAQ2M3V2 549 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 MGAT5BQ3V5L5 792 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 PRSS36Q5K4E3 855 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 CYP4A22Q5TCH4 519 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 CEP135Q66GS9 1140 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 BMP8AQ7Z5Y6 402 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 OSTM1Q86WC4 334 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 SMYD4Q8IYR2 804 aaPredicted RBP14.76□□□□□ -0.05
LTBR-202ENST00000440421 ADGRF2Q8IZF7 708 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 ENGASEQ8NFI3 743 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 PLEKHO2Q8TD55 490 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 FGF14Q92915 247 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 RPP25Q9BUL9 199 aaKnown RBP14.76□□□□□ -0.05
LTBR-202ENST00000440421 DMAC2Q9NW81 257 aa14.76□□□□□ -0.05
LTBR-202ENST00000440421 ABI2Q9NYB9 513 aaPredicted RBP14.76□□□□□ -0.05
LTBR-202ENST00000440421 ZNF197O14709 1029 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 HCRTO43612 131 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 CALUO43852 315 aaPredicted RBP14.75□□□□□ -0.05
LTBR-202ENST00000440421 PHACTR2O75167 634 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 KIF20AO95235 890 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 CFHP08603 1231 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 GJA1P17302 382 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 MYL7Q01449 175 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 TRPC3Q13507 836 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 POTEHQ6S545 545 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 SLC9A9Q8IVB4 645 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 SUGP1Q8IWZ8 645 aaKnown RBP14.75□□□□□ -0.05
LTBR-202ENST00000440421 DCP1BQ8IZD4 617 aaKnown RBP14.75□□□□□ -0.05
LTBR-202ENST00000440421 TMEM86AQ8N2M4 240 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 FBXL6Q8N531 539 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 TOP6BLQ8N6T0 577 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 FAM200AQ8TCP9 573 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 ERCC4Q92889 916 aaPredicted RBP14.75□□□□□ -0.05
LTBR-202ENST00000440421 NXPE3Q969Y0 559 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 MMS19Q96T76 1030 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 KXD1Q9BQD3 176 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 DNAJC25Q9H1X3 360 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 AVENQ9NQS1 362 aaPredicted RBP14.75□□□□□ -0.05
LTBR-202ENST00000440421 ASAH2Q9NR71 780 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 TMLHEQ9NVH6 421 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 FBXL21Q9UKT6 434 aa14.75□□□□□ -0.05
LTBR-202ENST00000440421 CIZ1Q9ULV3 898 aaPredicted RBP14.75□□□□□ -0.05
LTBR-202ENST00000440421 TRIOO75962 3097 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms