RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 SSTR3P32745 418 aaPredicted RBP5.09□□□□□ -1.59
EDEM3-203ENST00000439962 PSMC2P35998 433 aaKnown RBP5.09□□□□□ -1.59
EDEM3-203ENST00000439962 BMPR1AP36894 532 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 RFC5P40937 340 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 TNFSF9P41273 254 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 SLC20A2Q08357 652 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 KCNH2Q12809 1159 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 CUL1Q13616 776 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 PTPN21Q16825 1174 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 KLHDC7AQ5VTJ3 777 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 NOTUMQ6P988 496 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 KCNT2Q6UVM3 1135 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 LEKR1Q6ZMV7 388 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 SFR1Q86XK3 245 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 FAM178BQ8IXR5 827 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 SYCP3Q8IZU3 236 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 VPS52Q8N1B4 723 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 NOA1Q8NC60 698 aaKnown RBP5.09□□□□□ -1.59
EDEM3-203ENST00000439962 MCPH1Q8NEM0 835 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 APBB2Q92870 758 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 SAAL1Q96ER3 474 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 RUNDC3BQ96NL0 473 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 JPH2Q9BR39 696 aaPredicted RBP5.09□□□□□ -1.59
EDEM3-203ENST00000439962 CRACR2AQ9BSW2 395 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 LSM14BQ9BX40 385 aaKnown RBP5.09□□□□□ -1.59
EDEM3-203ENST00000439962 STRA6Q9BX79 667 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 FTHL17Q9BXU8 183 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 SEZ6LQ9BYH1 1024 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 TMEM206Q9H813 350 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 RSAD1Q9HA92 442 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 RGS18Q9NS28 235 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 TBC1D13Q9NVG8 400 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 DMAC2Q9NW81 257 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 PCDHB13Q9Y5F0 798 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 PCDHB12Q9Y5F1 795 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 COL1A2P08123 1366 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 CACNA1HO95180 2353 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 F5P12259 2224 aa5.09□□□□□ -1.59
EDEM3-203ENST00000439962 IGKV6-21A0A0C4DH24 114 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 RCCD1A6NED2 376 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 DLL1O00548 723 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 CLIC2O15247 247 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 RECQL4O94761 1208 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 PRPF6O94906 941 aaKnown RBP5.09□□□□□ -1.6
EDEM3-203ENST00000439962 NR2F2P24468 414 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 CASP5P51878 434 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 KLHL30Q0D2K2 578 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 STRN3Q13033 797 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 AMHR2Q16671 573 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 EXOC3L4Q17RC7 722 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 ATF7IP2Q5U623 682 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 LRIG3Q6UXM1 1119 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 TAS1R1Q7RTX1 841 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 CROCCP2Q86T23 111 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 NPAS4Q8IUM7 802 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 RASGEF1CQ8N431 466 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 C3orf20Q8ND61 904 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 PHOSPHO2Q8TCD6 241 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 NAP1L3Q99457 506 aaPredicted RBP5.09□□□□□ -1.6
EDEM3-203ENST00000439962 ADPGKQ9BRR6 497 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 TLR10Q9BXR5 811 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 SLITRK6Q9H5Y7 841 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 FAM207AQ9NSI2 230 aaPredicted RBP5.09□□□□□ -1.6
EDEM3-203ENST00000439962 ANKEF1Q9NU02 776 aa5.09□□□□□ -1.6
EDEM3-203ENST00000439962 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.09□□□□□ -1.6
EDEM3-203ENST00000439962 A0A0U1RQJ8 604 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 B3GAT3O94766 335 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 PARNO95453 639 aaKnown RBP5.08□□□□□ -1.6
EDEM3-203ENST00000439962 NR3C1P04150 777 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 RHOXF2BP0C7M4 288 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 CXCL8P10145 99 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 UCHL3P15374 230 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 ARL2P36404 184 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 STAT1P42224 750 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 KLK7P49862 253 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 LIG4P49917 911 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 SMTNP53814 917 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 SKOR1P84550 965 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 NOMO2Q5JPE7 1267 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 FAM26DQ5JW98 314 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 PPP1R2P3Q6NXS1 205 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 TMC5Q6UXY8 1006 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 C1orf186Q6ZWK4 172 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 IRF2BP2Q7Z5L9 587 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 LINC01465Q8N7H1 131 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 SMG8Q8ND04 991 aaKnown RBP5.08□□□□□ -1.6
EDEM3-203ENST00000439962 BCL7CQ8WUZ0 217 aaPredicted RBP5.08□□□□□ -1.6
EDEM3-203ENST00000439962 ATRIPQ8WXE1 791 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 TAF4BQ92750 862 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 C18orf25Q96B23 403 aaPredicted RBP5.08□□□□□ -1.6
EDEM3-203ENST00000439962 CASD1Q96PB1 797 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 RHOXF2Q9BQY4 288 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 STK33Q9BYT3 514 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 NRDE2Q9H7Z3 1164 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 TLE6Q9H808 572 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 C17orf75Q9HAS0 396 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 PARVGQ9HBI0 331 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 PDE11AQ9HCR9 933 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 TMEM161AQ9NX61 479 aa5.08□□□□□ -1.6
EDEM3-203ENST00000439962 STXBP5LQ9Y2K9 1186 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms