RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 AGO3Q9H9G7 860 aaKnown RBP15.99■□□□□ 0.15
CPSF7-205ENST00000439958 DDX20Q9UHI6 824 aaKnown RBP15.99■□□□□ 0.15
CPSF7-205ENST00000439958 ITGA11Q9UKX5 1188 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 NCANO14594 1321 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 KPNA6O60684 536 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 PAK2Q13177 524 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 KAZNQ674X7 775 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 SNX27Q96L92 541 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 NENFQ9UMX5 172 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 HEXIM1O94992 359 aaKnown RBP15.99■□□□□ 0.15
CPSF7-205ENST00000439958 UNGP13051 313 aaPredicted RBP15.99■□□□□ 0.15
CPSF7-205ENST00000439958 PSMC1P62191 440 aaKnown RBP15.99■□□□□ 0.15
CPSF7-205ENST00000439958 ZNF677Q86XU0 584 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 EMC1Q8N766 993 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 ARRDC4Q8NCT1 418 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 TMEM176AQ96HP8 235 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 HHIPL1Q96JK4 782 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 RPGRIP1Q96KN7 1286 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 HMX1Q9NP08 348 aaPredicted RBP15.99■□□□□ 0.15
CPSF7-205ENST00000439958 AMACRQ9UHK6 382 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 C2CD2Q9Y426 696 aa15.99■□□□□ 0.15
CPSF7-205ENST00000439958 ADAMTS4O75173 837 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 CHRNA1P02708 482 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 ACAT1P24752 427 aaKnown RBP15.98■□□□□ 0.15
CPSF7-205ENST00000439958 ACLYP53396 1101 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 SNX1Q13596 522 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 EPB41L5Q9HCM4 733 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 STARD7Q9NQZ5 370 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 PTPN22Q9Y2R2 807 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 BTNL10A8MVZ5 291 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 PI4K2BG5E9Z4 385 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 I3L4J1 428 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 ADAM17P78536 824 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 CDO1Q16878 200 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 SGO2Q562F6 1265 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 USP38Q8NB14 1042 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 NT5C1AQ9BXI3 368 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 MIS12Q9H081 205 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 ATF7P17544 494 aaPredicted RBP15.98■□□□□ 0.15
CPSF7-205ENST00000439958 RAD23BP54727 409 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 ZNF618Q5T7W0 954 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 PBKQ96KB5 322 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 DPH5Q9H2P9 285 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 SNX25Q9H3E2 840 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 UVRAGQ9P2Y5 699 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 PADI3Q9ULW8 664 aa15.98■□□□□ 0.15
CPSF7-205ENST00000439958 UBQLN1Q9UMX0 589 aaKnown RBP15.98■□□□□ 0.15
CPSF7-205ENST00000439958 MED7O43513 233 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 GRK4P32298 578 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 SCNN1GP51170 649 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 FBXO47Q5MNV8 452 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 CC2D1AQ6P1N0 951 aaPredicted RBP15.97■□□□□ 0.15
CPSF7-205ENST00000439958 TRIM72Q6ZMU5 477 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.97■□□□□ 0.151e-7■■■■□ 22.8
CPSF7-205ENST00000439958 MRPL47Q9HD33 250 aaKnown RBP15.97■□□□□ 0.15
CPSF7-205ENST00000439958 ZNF446Q9NWS9 450 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 PTCH2Q9Y6C5 1203 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 GOLGA6L10A0A0M3HER8 536 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 O00370 1275 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 H2AFXP16104 143 aaPredicted RBP15.97■□□□□ 0.15
CPSF7-205ENST00000439958 PRLRP16471 622 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 CENPCQ03188 943 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 SOX4Q06945 474 aaPredicted RBP15.97■□□□□ 0.15
CPSF7-205ENST00000439958 OR6B2Q6IFH4 312 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 NME8Q8N427 588 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 RNF25Q96BH1 459 aaPredicted RBP15.97■□□□□ 0.15
CPSF7-205ENST00000439958 TRIM11Q96F44 468 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 ADAM2Q99965 735 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 FAM105AQ9NUU6 356 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 PCDH10Q9P2E7 1040 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 ENPEPQ07075 957 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 SLC4A11Q8NBS3 891 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 NR2E1Q9Y466 385 aa15.97■□□□□ 0.15
CPSF7-205ENST00000439958 TRIP11Q15643 1979 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 HUS1O60921 280 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 FKTNO75072 461 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 CYP1A2P05177 515 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 IGFBP6P24592 240 aaPredicted RBP15.96■□□□□ 0.15
CPSF7-205ENST00000439958 CCDC142Q17RM4 750 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 SMTNL2Q2TAL5 461 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 MTERF4Q7Z6M4 381 aaKnown RBP15.96■□□□□ 0.15
CPSF7-205ENST00000439958 HACE1Q8IYU2 909 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 HES6Q96HZ4 224 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 DPEP3Q9H4B8 488 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 ZWILCHQ9H900 591 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 PARVAQ9NVD7 372 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 HESX1Q9UBX0 185 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 PCSK1NQ9UHG2 260 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 TSPAN16Q9UKR8 245 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 XPOTO43592 962 aaKnown RBP15.96■□□□□ 0.15
CPSF7-205ENST00000439958 MICAL2O94851 1124 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 PYGMP11217 842 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 MAMLD1Q13495 774 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 SKIDA1Q1XH10 827 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 GOLGA7BQ2TAP0 167 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 C9orf57Q5W0N0 161 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 MON1BQ7L1V2 547 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.96■□□□□ 0.15
CPSF7-205ENST00000439958 KCNN1Q92952 543 aa15.96■□□□□ 0.15
CPSF7-205ENST00000439958 BARX2Q9UMQ3 279 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms