RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 RNF19BQ6ZMZ0 732 aa12.41□□□□□ -0.42
IRF1-204ENST00000439555 PDZD4Q76G19 769 aaPredicted RBP12.41□□□□□ -0.42
IRF1-204ENST00000439555 ELSPBP1Q96BH3 223 aa12.41□□□□□ -0.42
IRF1-204ENST00000439555 FAM212AQ96EL1 285 aa12.41□□□□□ -0.42
IRF1-204ENST00000439555 IER2Q9BTL4 223 aa12.41□□□□□ -0.42
IRF1-204ENST00000439555 GPR88Q9GZN0 384 aa12.41□□□□□ -0.42
IRF1-204ENST00000439555 TNMDQ9H2S6 317 aa12.41□□□□□ -0.42
IRF1-204ENST00000439555 TMEM206Q9H813 350 aa12.41□□□□□ -0.42
IRF1-204ENST00000439555 PRMT8Q9NR22 394 aaPredicted RBP12.41□□□□□ -0.42
IRF1-204ENST00000439555 USP18Q9UMW8 372 aa12.41□□□□□ -0.42
IRF1-204ENST00000439555 ASB3Q9Y575 518 aa12.41□□□□□ -0.42
IRF1-204ENST00000439555 TIMM13Q9Y5L4 95 aaPredicted RBP12.41□□□□□ -0.42
IRF1-204ENST00000439555 A0A087X0B3 334 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 TISP43B9A030 160 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 SPTLC2O15270 562 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 GCNT3O95395 438 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 IDEP14735 1019 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 PNPLA4P41247 253 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 GUCY2FP51841 1108 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 AMPD3Q01432 767 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 TWF1Q12792 350 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 FZD5Q13467 585 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 UBXN2BQ14CS0 331 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 STK38Q15208 465 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 ATL3Q6DD88 541 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 LAIR1Q6GTX8 287 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 CENPPQ6IPU0 288 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 CNNM4Q6P4Q7 775 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 STXBP4Q6ZWJ1 553 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 CCDC65Q8IXS2 484 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 MCRS1Q96EZ8 462 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 TRPV4Q9HBA0 871 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 ZFP14Q9HCL3 533 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 PARD6AQ9NPB6 346 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 TRPV5Q9NQA5 729 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 ASAH2Q9NR71 780 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 PANK4Q9NVE7 773 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 KBTBD4Q9NVX7 518 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 DPP3Q9NY33 737 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 CEP72Q9P209 647 aa12.4□□□□□ -0.42
IRF1-204ENST00000439555 MRPS17Q9Y2R5 130 aaKnown RBP12.4□□□□□ -0.42
IRF1-204ENST00000439555 MTF2Q9Y483 593 aaPredicted RBP12.4□□□□□ -0.42
IRF1-204ENST00000439555 PDCD11Q14690 1871 aaKnown RBP12.4□□□□□ -0.42
IRF1-204ENST00000439555 VWA8A3KMH1 1905 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 PPEF2O14830 753 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 CUTAO60888 179 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 VNN2O95498 520 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 FGF19O95750 216 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 RETP07949 1114 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 CEBPBP17676 345 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 CCR2P41597 374 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 ALDH1A3P47895 512 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 TAF6P49848 677 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 EPHB3P54753 998 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 KCNA1Q09470 495 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 DUSP4Q13115 394 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 PPP2R5DQ14738 602 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 TANGO2Q6ICL3 276 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 METTL23Q86XA0 190 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 BRSK2Q8IWQ3 736 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 SYCP3Q8IZU3 236 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 TMEM130Q8N3G9 435 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 C2orf15Q8WU43 125 aaKnown RBP12.39□□□□□ -0.43
IRF1-204ENST00000439555 CACTINQ8WUQ7 758 aaKnown RBP12.39□□□□□ -0.43
IRF1-204ENST00000439555 ING5Q8WYH8 240 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 DNASE1L2Q92874 299 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 SMARCD2Q92925 531 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 E2F7Q96AV8 911 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 ASB16Q96NS5 453 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 KXD1Q9BQD3 176 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 PANK2Q9BZ23 570 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 RAB23Q9ULC3 237 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 YIPF1Q9Y548 306 aa12.39□□□□□ -0.43
IRF1-204ENST00000439555 FAM208BQ5VWN6 2430 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 MTMR11A4FU01 709 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 KPNA7A9QM74 516 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 CYB561D2O14569 222 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 EXTL3O43909 919 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 MOSPD3O75425 235 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 FCARP24071 287 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 TUFMP49411 452 aaKnown RBP12.38□□□□□ -0.43
IRF1-204ENST00000439555 CASP5P51878 434 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 SHC2P98077 582 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 E2F4Q16254 413 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 CSRP2Q16527 193 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 SV2CQ496J9 727 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 FAM78AQ5JUQ0 283 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 POTEHQ6S545 545 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 ZNF852Q6ZMS4 543 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 EFCAB13Q8IY85 973 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 THEM5Q8N1Q8 247 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 IQUBQ8NA54 791 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 ATAD1Q8NBU5 361 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 ST13P5Q8NFI4 369 aaPredicted RBP12.38□□□□□ -0.43
IRF1-204ENST00000439555 DEPDC1BQ8WUY9 529 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 TCEAL4Q96EI5 215 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 FAM213AQ9BRX8 229 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 LRRC3Q9BY71 257 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 ZCWPW1Q9H0M4 648 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms