RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 HEY2Q9UBP5 337 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 NAV1Q8NEY1 1877 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 SGK1O00141 431 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 PIK3CDO00329 1044 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 ESRRAP11474 423 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 CCND2P30279 289 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 ADSSP30520 456 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 NLRP11P59045 1033 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 GAD2Q05329 585 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 GRIK3Q13003 919 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 TRPC3Q13507 836 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 BLMHQ13867 455 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 SMTNL2Q2TAL5 461 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 BSPRYQ5W0U4 402 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 NLRP9Q7RTR0 991 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 CCDC60Q8IWA6 550 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 TMEM130Q8N3G9 435 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 RFWD2Q8NHY2 731 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 CCHCR1Q8TD31 782 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 SLC7A3Q8WY07 619 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 RUBCNQ92622 972 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 HERPUD2Q9BSE4 406 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 JPH1Q9HDC5 661 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 PPARGC1AQ9UBK2 798 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 FBXO40Q9UH90 709 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 PCSK1NQ9UHG2 260 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 AGTPBP1Q9UPW5 1226 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 NOP56O00567 594 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 TRPA1O75762 1119 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 UNC5CO95185 931 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 HLA-DRAP01903 254 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 GJB1P08034 283 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 ATP6V1B1P15313 513 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 SSTR1P30872 391 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 PEX5P50542 639 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 WDR4P57081 412 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 TMED1Q13445 227 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 SLC1A5Q15758 541 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 STK32AQ8WU08 396 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 CNKSR2Q8WXI2 1034 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 PGM2Q96G03 612 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 FIZ1Q96SL8 496 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 THTPAQ9BU02 230 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 ACSS2Q9NR19 701 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 BATF3Q9NR55 127 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 PXMP2Q9NR77 195 aa10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 RBAKQ9NYW8 714 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 AGO2Q9UKV8 859 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-202ENST00000439374 CENPFP49454 3210 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 KIAA1551Q9HCM1 1747 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 SYNGAP1Q96PV0 1343 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZNF862O60290 1169 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 PEX11AO75192 247 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 RARGP13631 454 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 CALB2P22676 271 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 SERPINB3P29508 390 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 INHBEP58166 350 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 ACTR2P61160 394 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 FSTL1Q12841 308 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 PDIA2Q13087 525 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 TNFAIP1Q13829 316 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 BMT2Q1RMZ1 405 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 PPP6R3Q5H9R7 873 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 CYP4A22Q5TCH4 519 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 CCDC125Q86Z20 511 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 POU5F2Q8N7G0 328 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 IWS1Q96ST2 819 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 MOV10L1Q9BXT6 1211 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 CARD9Q9H257 536 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 DDX18Q9NVP1 670 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 PIM2Q9P1W9 311 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 TLR3O15455 904 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 PFDN1O60925 122 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 PGM3O95394 542 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 TAC1P20366 129 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 ALDH18A1P54886 795 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 PEX6Q13608 980 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 KCNT1Q5JUK3 1230 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 FYB2Q5VWT5 728 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 CGB2Q6NT52 195 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 PPP1R21Q6ZMI0 780 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 CEP70Q8NHQ1 597 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 TRAPPC12Q8WVT3 735 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 CLEC4DQ8WXI8 215 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 FHDC1Q9C0D6 1143 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 SLC9A2Q9UBY0 812 aa10.47□□□□□ -0.73
CDC42SE1-202ENST00000439374 FAM47DPA6NHR8 397 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 WDR46O15213 610 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 PSAPP07602 524 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 GNA15P30679 374 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 MSX2P35548 267 aaPredicted RBP10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 KRT76Q01546 638 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 FMO1Q01740 532 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 LRRC23Q53EV4 343 aaPredicted RBP10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 DALRD3Q5D0E6 543 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 CCDC62Q6P9F0 684 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 GPD1LQ8N335 351 aa10.46□□□□□ -0.73
CDC42SE1-202ENST00000439374 PPP1R14CQ8TAE6 165 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms