RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 MAFGO15525 162 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 PSAPP07602 524 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 NR3C2P08235 984 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 TNNI1P19237 187 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 TAC1P20366 129 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 GNA15P30679 374 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 ELF1P32519 619 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 MAGEA4P43358 317 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 PRKCEQ02156 737 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 LMNB2Q03252 620 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 ACVR2BQ13705 512 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 SEPT14Q6ZU15 432 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 CCHCR1Q8TD31 782 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 KCNN1Q92952 543 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 RBM15Q96T37 977 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 ACAD9Q9H845 621 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 PCDHB4Q9Y5E5 795 aa17.35■□□□□ 0.37
CLCNKA-203ENST00000439316 A0A0G2JMZ2 1700 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 KIAA1217Q5T5P2 1943 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 IGF2BP3O00425 579 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 LIASO43766 372 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 ALDH5A1P51649 535 aaPredicted RBP17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 NFX1Q12986 1120 aaKnown RBP17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 P3H1Q32P28 736 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 SWSAP1Q6NVH7 229 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 MIS18BP1Q6P0N0 1132 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 TLDC1Q6P9B6 456 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 DRICH1Q6PGQ1 229 aaPredicted RBP17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 PRUNE1Q86TP1 453 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 ANKRD35Q8N283 1001 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 FITM2Q8N6M3 262 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 GRAMD1AQ96CP6 724 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 RMDN2Q96LZ7 410 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 TELO2Q9Y4R8 837 aa17.34■□□□□ 0.37
CLCNKA-203ENST00000439316 FAM47DPA6NHR8 397 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 DNALI1O14645 258 aaPredicted RBP17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 TLR3O15455 904 aaKnown RBP17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 GCAP28676 217 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 FOXN2P32314 431 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 GJC1P36383 396 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 CCDC15Q0P6D6 951 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 NR1H3Q13133 447 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 TMED2Q15363 201 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 TMEM270Q6UE05 265 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 ASRGL1Q7L266 308 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 FASTKD5Q7L8L6 764 aaKnown RBP17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 TDRPQ86YL5 185 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 CCDC60Q8IWA6 550 aaPredicted RBP17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 RBBP8NLQ8NC74 664 aaPredicted RBP17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 FEZF2Q8TBJ5 459 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 CFAP57Q96MR6 1250 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 ARHGEF3Q9NR81 526 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 AGO2Q9UKV8 859 aaKnown RBP17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 PNMA3Q9UL41 463 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 USTQ9Y2C2 406 aa17.33■□□□□ 0.37
CLCNKA-203ENST00000439316 GSTTP1A0A1W2PQM5 241 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 RASA4BC9J798 803 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 RASA4O43374 803 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 RGS20O76081 388 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 PIGRP01833 764 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 ACOT2P49753 483 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 WDR4P57081 412 aaKnown RBP17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 IL9RQ01113 521 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 MGAT5Q09328 741 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 SNAPC2Q13487 334 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 CCDC142Q17RM4 750 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 CYP4F22Q6NT55 531 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 GSTA5Q7RTV2 222 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 TRABD2AQ86V40 505 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 ANKLE1Q8NAG6 615 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 KLHL29Q96CT2 875 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 RBM41Q96IZ5 413 aaKnown RBP17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 TTC25Q96NG3 672 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 SLITRK1Q96PX8 696 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 HAPLN2Q9GZV7 340 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 EBF2Q9HAK2 575 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 GBA2Q9HCG7 927 aaPredicted RBP17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 JPH1Q9HDC5 661 aaPredicted RBP17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 UBN1Q9NPG3 1134 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 PARVAQ9NVD7 372 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 CYP39A1Q9NYL5 469 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 IP6K2Q9UHH9 426 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 DOCK5Q9H7D0 1870 aa17.33■□□□□ 0.36
CLCNKA-203ENST00000439316 A0A1B0GUA9 196 aa17.32■□□□□ 0.36
CLCNKA-203ENST00000439316 CELF2O95319 508 aaKnown RBP17.32■□□□□ 0.36
CLCNKA-203ENST00000439316 TBXAS1P24557 533 aaPredicted RBP17.32■□□□□ 0.36
CLCNKA-203ENST00000439316 CETN2P41208 172 aa17.32■□□□□ 0.36
CLCNKA-203ENST00000439316 SKIV2L2P42285 1042 aaKnown RBP17.32■□□□□ 0.36
CLCNKA-203ENST00000439316 GPAT2Q6NUI2 795 aa17.32■□□□□ 0.36
CLCNKA-203ENST00000439316 RCOR2Q8IZ40 523 aa17.32■□□□□ 0.36
CLCNKA-203ENST00000439316 TBC1D31Q96DN5 1066 aa17.32■□□□□ 0.36
CLCNKA-203ENST00000439316 CGRRF1Q99675 332 aa17.32■□□□□ 0.36
CLCNKA-203ENST00000439316 SAYSD1Q9NPB0 183 aa17.32■□□□□ 0.36
CLCNKA-203ENST00000439316 KLHL14Q9P2G3 628 aa17.32■□□□□ 0.36
CLCNKA-203ENST00000439316 LOC102724159A0A0B4J2E5 919 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 EXOC1LA0A1B0GW35 172 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 UNCXA6NJT0 531 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 MAGEB2O15479 319 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 PRPF4O43172 522 aaKnown RBP eCLIP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms