RNA–Protein interactions for RNA: ENST00000438902.6

ACTG2-206, Transcript of actin, gamma 2, smooth muscle, enteric, human

TSL 5

Gene ACTG2, Length 1,921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACTG2-206	ENST00000438902	SOX4	Q06945	474 aa	Predicted RBP	13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	C1QBP	Q07021	282 aa	Known RBP	13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	BRD3	Q15059	726 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	PLEKHA7	Q6IQ23	1121 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	VCPIP1	Q96JH7	1222 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	SELENOO	Q9BVL4	669 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	AP1M1	Q9BXS5	423 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	AGO3	Q9H9G7	860 aa	Known RBP	13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	PARP2	Q9UGN5	583 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	DDX20	Q9UHI6	824 aa	Known RBP	13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	ANAPC7	Q9UJX3	599 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	NR2E1	Q9Y466	385 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	LSM8	O95777	96 aa	Known RBP	13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	PAEP	P09466	180 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	CD19	P15391	556 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	HOXD10	P28358	340 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	NDST1	P52848	882 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	INCA1	Q0VD86	236 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	DAB2IP	Q5VWQ8	1189 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	C9orf57	Q5W0N0	161 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	SMYD5	Q6GMV2	418 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	TWF2	Q6IBS0	349 aa	Known RBP	13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	TMCO3	Q6UWJ1	677 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	RPAIN	Q86UA6	219 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	TRIM11	Q96F44	468 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	TMEM176A	Q96HP8	235 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	MRPL45	Q9BRJ2	306 aa	Known RBP	13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	CARD9	Q9H257	536 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	GOLGA2P5	Q9HBQ8	144 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	TJP2	Q9UDY2	1190 aa		13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.74	□□□□□ -0.21
ACTG2-206	ENST00000438902	PGRMC1	O00264	195 aa	Known RBP	13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	RPS6KA5	O75582	802 aa		13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	SASH3	O75995	380 aa		13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	MYBL2	P10244	700 aa		13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	KCNE1	P15382	129 aa		13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	PTPN11	Q06124	597 aa	Predicted RBP	13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	NFX1	Q12986	1120 aa	Known RBP	13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	PTGIS	Q16647	500 aa		13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	KCTD19	Q17RG1	926 aa	Predicted RBP	13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	BEST2	Q8NFU1	509 aa		13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	RAET1E	Q8TD07	263 aa		13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	RNPC3	Q96LT9	517 aa	Known RBP	13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	KRT12	Q99456	494 aa		13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	PLEKHA4	Q9H4M7	779 aa		13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	TRMT13	Q9NUP7	481 aa	Known RBP	13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	SNX9	Q9Y5X1	595 aa		13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	CASP8AP2	Q9UKL3	1982 aa		13.73	□□□□□ -0.21
ACTG2-206	ENST00000438902	MIF4GD	A9UHW6	222 aa	Known RBP	13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902		M0QZ92	97 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	PIR	O00625	290 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	SPTLC1	O15269	473 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	FGG	P02679	453 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	P4HA1	P13674	534 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	CYP3A5	P20815	502 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	IGFBP6	P24592	240 aa	Predicted RBP	13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	CTNNA1	P35221	906 aa	Known RBP	13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	THPO	P40225	353 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	AFF1	P51825	1210 aa	Known RBP	13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	RPL7A	P62424	266 aa	Known RBP	13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	TNNC1	P63316	161 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	ITGA7	Q13683	1181 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	PTPN20	Q4JDL3	420 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	RSPH3	Q86UC2	560 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	ZDHHC14	Q8IZN3	488 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	TMEM35B	Q8NCS4	154 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	PXYLP1	Q8TE99	480 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	WNT8A	Q9H1J5	351 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	LHX5	Q9H2C1	402 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	UBQLN1	Q9UMX0	589 aa	Known RBP	13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	PCDHA3	Q9Y5H8	950 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	CIT	O14578	2027 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	PTGES	O14684	152 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	SPOP	O43791	374 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	MICAL2	O94851	1124 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	PYGM	P11217	842 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	CTNNA2	P26232	953 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	ACLY	P53396	1101 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	MYO1E	Q12965	1108 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	LONRF2	Q1L5Z9	754 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	LIN9	Q5TKA1	542 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	LHX8	Q68G74	356 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	KLHL7	Q8IXQ5	586 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	GSPT2	Q8IYD1	628 aa	Known RBP	13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	LRRC52	Q8N7C0	313 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	C12orf29	Q8N999	325 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	PCSK9	Q8NBP7	692 aa	Known RBP	13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	GSTCD	Q8NEC7	633 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	ZFP42	Q96MM3	310 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	ZNF518B	Q9C0D4	1074 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	ARFGAP3	Q9NP61	516 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	TRIP11	Q15643	1979 aa		13.72	□□□□□ -0.21
ACTG2-206	ENST00000438902	SCN1A	P35498	2009 aa		13.71	□□□□□ -0.21
ACTG2-206	ENST00000438902	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.71	□□□□□ -0.21
ACTG2-206	ENST00000438902	MYO1F	O00160	1098 aa		13.71	□□□□□ -0.21
ACTG2-206	ENST00000438902		O00370	1275 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms