RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SCAPQ12770 1279 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 SEMA3BQ13214 749 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 PRPF4BQ13523 1007 aaKnown RBP12.22□□□□□ -0.45
CSTF3-203ENST00000438862 HNRNPDQ14103 355 aaKnown RBP12.22□□□□□ -0.45
CSTF3-203ENST00000438862 CTTNQ14247 550 aaKnown RBP12.22□□□□□ -0.45
CSTF3-203ENST00000438862 TSGA10IPQ3SY00 556 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 ARHGAP15Q53QZ3 475 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 GLRA4Q5JXX5 417 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 ZNF280DQ6N043 979 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 RAB44Q7Z6P3 723 aaPredicted RBP12.22□□□□□ -0.45
CSTF3-203ENST00000438862 TMC8Q8IU68 726 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 TPH2Q8IWU9 490 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 CCDC43Q96MW1 224 aaKnown RBP12.22□□□□□ -0.45
CSTF3-203ENST00000438862 C2orf40Q9H1Z8 148 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 CCDC86Q9H6F5 360 aaKnown RBP12.22□□□□□ -0.45
CSTF3-203ENST00000438862 SLC38A7Q9NVC3 462 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 ASB3Q9Y575 518 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 M0R2N6 131 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 ACKR2O00590 384 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 MARCH6O60337 910 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 LYPLA2O95372 231 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 HMGB1P09429 215 aaKnown RBP12.21□□□□□ -0.45
CSTF3-203ENST00000438862 CPB1P15086 417 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 HSPA4P34932 840 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 MLLT3P42568 568 aaPredicted RBP12.21□□□□□ -0.45
CSTF3-203ENST00000438862 MCM2P49736 904 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 ANAPC15P60006 121 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 CYP4A11Q02928 519 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 RUNX3Q13761 415 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 DMC1Q14565 340 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 NTRK3Q16288 839 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 MAPK6Q16659 721 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 DCAF4L1Q3SXM0 396 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 STXBP5Q5T5C0 1151 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 CDCA2Q69YH5 1023 aaPredicted RBP12.21□□□□□ -0.45
CSTF3-203ENST00000438862 BLIDQ8IZY5 108 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 APPL2Q8NEU8 664 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 HNRNPLLQ8WVV9 542 aaKnown RBP12.21□□□□□ -0.45
CSTF3-203ENST00000438862 PIGKQ92643 395 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 KCNB2Q92953 911 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 ACDQ96AP0 544 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 TMUB1Q9BVT8 246 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 SLC26A6Q9BXS9 759 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 OXCT2Q9BYC2 517 aaPredicted RBP12.21□□□□□ -0.45
CSTF3-203ENST00000438862 POLR3FQ9H1D9 316 aaPredicted RBP12.21□□□□□ -0.45
CSTF3-203ENST00000438862 ATXN3LQ9H3M9 355 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 GOLGA2P5Q9HBQ8 144 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 GKN1Q9NS71 199 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 NUB1Q9Y5A7 615 aa12.21□□□□□ -0.45
CSTF3-203ENST00000438862 MAST4O15021 2626 aa12.21□□□□□ -0.46
CSTF3-203ENST00000438862 NID2Q14112 1375 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 SMIM28A0A1B0GU29 152 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 EGFP01133 1207 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 XRCC6P12956 609 aaKnown RBP eCLIP12.2□□□□□ -0.46
CSTF3-203ENST00000438862 GCFC2P16383 781 aaKnown RBP12.2□□□□□ -0.46
CSTF3-203ENST00000438862 IFNAR1P17181 557 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 RPL9P32969 192 aaKnown RBP12.2□□□□□ -0.46
CSTF3-203ENST00000438862 DPP6P42658 865 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 ALDH1A3P47895 512 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 DHPSP49366 369 aaPredicted RBP12.2□□□□□ -0.46
CSTF3-203ENST00000438862 TRIM61Q5EBN2 209 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 GPR158Q5T848 1215 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 NCAPH2Q6IBW4 605 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 GALNT17Q6IS24 598 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 RNF19BQ6ZMZ0 732 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 APBB1IPQ7Z5R6 666 aaPredicted RBP12.2□□□□□ -0.46
CSTF3-203ENST00000438862 FAM177A1Q8N128 213 aaPredicted RBP12.2□□□□□ -0.46
CSTF3-203ENST00000438862 BEST2Q8NFU1 509 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 CCDC26Q8TAB7 109 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 FAM83CQ9BQN1 747 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 POLR3BQ9NW08 1133 aaPredicted RBP12.2□□□□□ -0.46
CSTF3-203ENST00000438862 ZMYM5Q9UJ78 669 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 YIPF1Q9Y548 306 aa12.2□□□□□ -0.46
CSTF3-203ENST00000438862 PODXLO00592 558 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 BAG4O95429 457 aaKnown RBP12.19□□□□□ -0.46
CSTF3-203ENST00000438862 ENGP17813 658 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 GGCXP38435 758 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 MAPK8P45983 427 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 RARRES1P49788 294 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 GALK1P51570 392 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 YARSP54577 528 aaKnown RBP12.19□□□□□ -0.46
CSTF3-203ENST00000438862 KRT32Q14532 448 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 INF2Q27J81 1249 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 XKR4Q5GH76 650 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 SLC23A3Q6PIS1 610 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 GAREM2Q75VX8 874 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 KRT25Q7Z3Z0 450 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 SLFN12Q8IYM2 578 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 HDDC3Q8N4P3 179 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 DAGLBQ8NCG7 672 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 MCPH1Q8NEM0 835 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 RPLP0P6Q8NHW5 317 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 HAS1Q92839 578 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 LRIG1Q96JA1 1093 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 SUSD3Q96L08 255 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 NAP1L4Q99733 375 aaKnown RBP12.19□□□□□ -0.46
CSTF3-203ENST00000438862 P2RY13Q9BPV8 354 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 HSD17B14Q9BPX1 270 aa12.19□□□□□ -0.46
CSTF3-203ENST00000438862 DNAJC25Q9H1X3 360 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms