RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SLC45A2Q9UMX9 530 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 POLHQ9Y253 713 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 TOP2AP11388 1531 aaKnown RBP4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 UHRF1BP1Q6BDS2 1440 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 CD109Q6YHK3 1445 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 POGZQ7Z3K3 1410 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 E9PLN8 166 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 SLC16A6O15403 523 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 PPFIA2O75334 1257 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 ARIH2O95376 493 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 IL33O95760 270 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 FTH1P19P0C7X4 201 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 LPOP22079 712 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 CXCR5P32302 372 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 PLA2G5P39877 138 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 FOLR3P41439 243 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 HK3P52790 923 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 EPHB1P54762 984 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 RPS7P62081 194 aaKnown RBP4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 TCF15Q12870 199 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 PIN1Q13526 163 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 PPP2R5AQ15172 486 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 UAP1L1Q3KQV9 507 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 VWA1Q6PCB0 445 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 GADL1Q6ZQY3 521 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 USP45Q70EL2 814 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 CLNKQ7Z7G1 428 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 FAM90A1Q86YD7 464 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 WDR75Q8IWA0 830 aaKnown RBP4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 MIER2Q8N344 545 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 SLC44A3Q8N4M1 653 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 C3orf20Q8ND61 904 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 TMIEQ8NEW7 156 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 CAGE1Q8TC20 777 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 POC1BQ8TC44 478 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 VKORC1Q9BQB6 163 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 AIFM2Q9BRQ8 373 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 PACSIN1Q9BY11 444 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 RTFDC1Q9BY42 306 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 CASS4Q9NQ75 786 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 RLIMQ9NVW2 624 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 INSL6Q9Y581 213 aa4.28□□□□□ -1.72
HMGB3P12-201ENST00000438745 ZNF335Q9H4Z2 1342 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 SCGB1D2O95969 90 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 PF4V1P10720 104 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 AKAP5P24588 427 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 PRDX5P30044 214 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 ANXA11P50995 505 aaKnown RBP4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 FPGSQ05932 587 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 ZNF844Q08AG5 666 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 HLXQ14774 488 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 ERCC6LQ2NKX8 1250 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 CCDC93Q567U6 631 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 STRIP1Q5VSL9 837 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 DPY19L2P1Q6NXN4 242 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 SLC4A10Q6U841 1118 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 ADGRG3Q86Y34 549 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 PDPRQ8NCN5 879 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 SLC17A8Q8NDX2 589 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 SSH3Q8TE77 659 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 JPH3Q8WXH2 748 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 SCAMP4Q969E2 229 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 R3HDMLQ9H3Y0 253 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 GPR35Q9HC97 309 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 INTS13Q9NVM9 706 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 CHPF2Q9P2E5 772 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 DMTF1Q9Y222 760 aa4.27□□□□□ -1.73
HMGB3P12-201ENST00000438745 SPATA31A3Q5VYP0 1347 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 TRGV11A0A075B6L2 103 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 CCDC195A0A1B0GUA6 201 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 MPPED1O15442 326 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 CACNA2D1P54289 1103 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 KIF22Q14807 665 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 PTPRRQ15256 657 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 SF3B3Q15393 1217 aaKnown RBP4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 NFE2Q16621 373 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 THEMIS2Q5TEJ8 643 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 MICALCLQ6ZW33 695 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 TPH2Q8IWU9 490 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 CHPFQ8IZ52 775 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 AOPEPQ8N6M6 819 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 ZNF764Q96H86 408 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 LRGUKQ96M69 825 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 NUP88Q99567 741 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 RHOBTB2Q9BYZ6 727 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 IMPG2Q9BZV3 1241 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 SEMA4GQ9NTN9 838 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 ETAA1Q9NY74 926 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 MAGI3Q5TCQ9 1506 aa4.26□□□□□ -1.73
HMGB3P12-201ENST00000438745 CCDC88BA6NC98 1476 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 WDR27A2RRH5 827 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 LRRC14BA6NHZ5 514 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 YY2O15391 372 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 PRPF3O43395 683 aaKnown RBP4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 C1QL1O75973 258 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 ABLIM3O94929 683 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 PTH2RP49190 550 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 ELLP55199 621 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 MRPS35P82673 323 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms