RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ZSCAN23Q3MJ62 389 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 OSTM1Q86WC4 334 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 OR10T2Q8NGX3 314 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 KBTBD7Q8WVZ9 684 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 CASP10Q92851 521 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 SEMA4DQ92854 862 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 FUCA2Q9BTY2 467 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 SMYD3Q9H7B4 428 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 VRTNQ9H8Y1 702 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 MAN1C1Q9NR34 630 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 SAMSN1Q9NSI8 373 aaKnown RBP17.33■□□□□ 0.36
SNRPB-202ENST00000438552 CLEC1BQ9P126 229 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 THEGQ9P2T0 379 aa17.33■□□□□ 0.36
SNRPB-202ENST00000438552 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.33■□□□□ 0.36
SNRPB-202ENST00000438552 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.32■□□□□ 0.36
SNRPB-202ENST00000438552 OR6C75A6NL08 312 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 LETM1O95202 739 aaPredicted RBP17.32■□□□□ 0.36
SNRPB-202ENST00000438552 MTIF2P46199 727 aaKnown RBP17.32■□□□□ 0.36
SNRPB-202ENST00000438552 RAP1GAPP47736 663 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 NOP14P78316 857 aaKnown RBP17.32■□□□□ 0.36
SNRPB-202ENST00000438552 RAB33AQ14088 237 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 SGSM1Q2NKQ1 1148 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 ZNF667Q5HYK9 610 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 LIMS2Q7Z4I7 341 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 FAM114A1Q8IWE2 563 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 TMEM86AQ8N2M4 240 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 FBXL13Q8NEE6 735 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 ENOX1Q8TC92 643 aaKnown RBP17.32■□□□□ 0.36
SNRPB-202ENST00000438552 APOL5Q9BWW9 433 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 IMPG2Q9BZV3 1241 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 APOBEC3GQ9HC16 384 aaKnown RBP17.32■□□□□ 0.36
SNRPB-202ENST00000438552 FBXW11Q9UKB1 542 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 COG5Q9UP83 839 aa17.32■□□□□ 0.36
SNRPB-202ENST00000438552 SPDYE4A6NLX3 237 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 ACAT1P24752 427 aaKnown RBP17.31■□□□□ 0.36
SNRPB-202ENST00000438552 CDR1P51861 262 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 MYL5Q02045 173 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 KCNH2Q12809 1159 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 ANKRD54Q6NXT1 300 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 LILRA6Q6PI73 481 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 TMEM184AQ6ZMB5 413 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 THEM5Q8N1Q8 247 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 TAF4BQ92750 862 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 MSLNLQ96KJ4 702 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 MRPL45Q9BRJ2 306 aaKnown RBP17.31■□□□□ 0.36
SNRPB-202ENST00000438552 SDCBP2Q9H190 292 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 DZANK1Q9NVP4 752 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 RAB20Q9NX57 234 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 DDX43Q9NXZ2 648 aaKnown RBP17.31■□□□□ 0.36
SNRPB-202ENST00000438552 MAGEC2Q9UBF1 373 aaPredicted RBP17.31■□□□□ 0.36
SNRPB-202ENST00000438552 UNC80Q8N2C7 3258 aa17.31■□□□□ 0.36
SNRPB-202ENST00000438552 PTPRDP23468 1912 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 KCNJ18B7U540 433 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 N4BP1O75113 896 aaKnown RBP17.3■□□□□ 0.36
SNRPB-202ENST00000438552 AFPP02771 609 aaKnown RBP17.3■□□□□ 0.36
SNRPB-202ENST00000438552 WARSP23381 471 aaKnown RBP17.3■□□□□ 0.36
SNRPB-202ENST00000438552 ASPAP45381 313 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 KCNJ12Q14500 433 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 CCDC142Q17RM4 750 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 CDKAL1Q5VV42 579 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 SYCE2Q6PIF2 218 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 RNF19BQ6ZMZ0 732 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 DPH6Q7L8W6 267 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 C12orf76Q8N812 135 aaPredicted RBP17.3■□□□□ 0.36
SNRPB-202ENST00000438552 KREMEN2Q8NCW0 462 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 FEZF2Q8TBJ5 459 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 PGLYRP2Q96PD5 576 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 OXCT2Q9BYC2 517 aaPredicted RBP17.3■□□□□ 0.36
SNRPB-202ENST00000438552 NIF3L1Q9GZT8 377 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 COQ4Q9Y3A0 265 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 DENND4AQ7Z401 1863 aa17.3■□□□□ 0.36
SNRPB-202ENST00000438552 GABRDO14764 452 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 P4HA1P13674 534 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 CDH8P55286 799 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 SLC39A12Q504Y0 691 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 RARS2Q5T160 578 aaKnown RBP17.29■□□□□ 0.36
SNRPB-202ENST00000438552 CCDC150Q8NCX0 1101 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 SLC7A14Q8TBB6 771 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 SPATA18Q8TC71 538 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 NAT10Q9H0A0 1025 aaKnown RBP17.29■□□□□ 0.36
SNRPB-202ENST00000438552 ZCWPW1Q9H0M4 648 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 SNX25Q9H3E2 840 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 SFXN1Q9H9B4 322 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 FANCLQ9NW38 375 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 CD207Q9UJ71 328 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 CDH22Q9UJ99 828 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 NME7Q9Y5B8 376 aa17.29■□□□□ 0.36
SNRPB-202ENST00000438552 TACC1O75410 805 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 RFPL2O75678 378 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 ABLIM3O94929 683 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 SEC24AO95486 1093 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 VNN2O95498 520 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 C8AP07357 584 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 LMO2P25791 158 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 LHX1P48742 406 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 PSMC1P62191 440 aaKnown RBP17.28■□□□□ 0.36
SNRPB-202ENST00000438552 TSPY1Q01534 308 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 ADCY1Q08828 1119 aa17.28■□□□□ 0.36
SNRPB-202ENST00000438552 NCAPHQ15003 741 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms