RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 RAD51Q06609 339 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 SLC9A5Q14940 896 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 STILQ15468 1287 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 SHROOM1Q2M3G4 852 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-209ENST00000437951 RORBQ92753 470 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 SENP7Q9BQF6 1050 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 SARS2Q9NP81 518 aaKnown RBP12.02□□□□□ -0.49
PTCH1-209ENST00000437951 HSPBP1Q9NZL4 362 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 AP3M1Q9Y2T2 418 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 ABLIM1O14639 778 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 P4HA2O15460 535 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 EIF2B5Q13144 721 aaKnown RBP12.02□□□□□ -0.49
PTCH1-209ENST00000437951 DRAP1Q14919 205 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-209ENST00000437951 ZNF618Q5T7W0 954 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 TRIM65Q6PJ69 517 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTCH1-209ENST00000437951 SYN2Q92777 582 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-209ENST00000437951 BCS1LQ9Y276 419 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 STARD13Q9Y3M8 1113 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 CNTN1Q12860 1018 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 CCDC182A6NF36 153 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 NEMP1O14524 444 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 NPR3P17342 541 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 MTTPP55157 894 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 LRRC74AQ0VAA2 488 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 TMEM270Q6UE05 265 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 LINC00523Q86TU6 105 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 KIAA0825Q8IV33 1275 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 OSCP1Q8WVF1 389 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 ZIM3Q96PE6 472 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 RGS18Q9NS28 235 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 A2MP01023 1474 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 UBA6A0AVT1 1052 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-209ENST00000437951 RAD51BO15315 384 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 SYNCRIPO60506 623 aaKnown RBP12.01□□□□□ -0.49
PTCH1-209ENST00000437951 ZCCHC18P0CG32 403 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 IL13P35225 146 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 E4F1Q66K89 784 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-209ENST00000437951 KIAA0408Q6ZU52 694 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 FNIP1Q8TF40 1166 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 ERP44Q9BS26 406 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 ALDH8A1Q9H2A2 487 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-209ENST00000437951 COPRSQ9NQ92 184 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 COMMD8Q9NX08 183 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 BTG4Q9NY30 223 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 CFAP74Q9C0B2 1584 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 PRCPP42785 496 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 ELOA2Q8IYF1 753 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-209ENST00000437951 C2orf40Q9H1Z8 148 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 KANSL2Q9H9L4 492 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 PLGRKTQ9HBL7 147 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 TIMMDC1Q9NPL8 285 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 EFCAB10A6NFE3 127 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 KCNN4O15554 427 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 CCNA2P20248 432 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 FAM83EQ2M2I3 478 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 TSHZ1Q6ZSZ6 1077 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 SH2D3CQ8N5H7 860 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 RNF25Q96BH1 459 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-209ENST00000437951 WDR24Q96S15 920 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 MNTQ99583 582 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 AGPAT1Q99943 283 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 PHTF1Q9UMS5 762 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 NCK2O43639 380 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 NDUFAF6Q330K2 333 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 TAS2R42Q7RTR8 314 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 TRAPPC11Q7Z392 1133 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 TMC4Q7Z404 712 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 ANKRD49Q8WVL7 239 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 NCKAP5LQ9HCH0 1330 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 TTC26A0AVF1 554 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 M0R2C6 588 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 OTUD4Q01804 1114 aaKnown RBP12.01□□□□□ -0.49
PTCH1-209ENST00000437951 STX12Q86Y82 276 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 DLG3Q92796 817 aa12.01□□□□□ -0.49
PTCH1-209ENST00000437951 A0A1B0GTH6 734 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 CEBPAP49715 358 aaPredicted RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 GPC3P51654 580 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 CHI3L2Q15782 390 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 KCNT1Q5JUK3 1230 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 UBASH3BQ8TF42 649 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 ASIC4Q96FT7 647 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 SPATA17Q96L03 361 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 STK33Q9BYT3 514 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 PCMTD2Q9NV79 361 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 PCDHB6Q9Y5E3 794 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 FASP25445 335 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 YWHABP31946 246 aaKnown RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 LLGL1Q15334 1064 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 THOC7Q6I9Y2 204 aaKnown RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 C9orf16Q9BUW7 83 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 RPRD1BQ9NQG5 326 aaKnown RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 MAPKAPK2P49137 400 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 FAM160B2Q86V87 743 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 PPIL6Q8IXY8 311 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 C6orf62Q9GZU0 229 aaPredicted RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 WHRNQ9P202 907 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 ATP6V1HQ9UI12 483 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 GGT7Q9UJ14 662 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms