RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 MAMLD1Q13495 774 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 SMTNL2Q2TAL5 461 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 DENND2CQ68D51 928 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 TAPT1Q6NXT6 567 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 C15orf39Q6ZRI6 1047 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 TAX1BP1Q86VP1 789 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 C1orf131Q8NDD1 294 aaKnown RBP10.05□□□□□ -0.8
CUX1-206ENST00000437600 SLC17A8Q8NDX2 589 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 C9orf72Q96LT7 481 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.05□□□□□ -0.8
CUX1-206ENST00000437600 MTUS1Q9ULD2 1270 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 SLC45A1Q9Y2W3 748 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 A0A0B4J269 797 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 GOLGA8SH3BPF8 625 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 SNAI1O95863 264 aaPredicted RBP10.05□□□□□ -0.8
CUX1-206ENST00000437600 NRLP54845 237 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 RTP1P59025 263 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 PPP2R2AP63151 447 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 DYNLT1P63172 113 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 GCNT1Q02742 428 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 ARHGAP1Q07960 439 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 SREBF2Q12772 1141 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 ZNF792Q3KQV3 632 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 EEF1DP3Q658K8 133 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 ZFYVE28Q9HCC9 887 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 SLC12A6Q9UHW9 1150 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 GABRQQ9UN88 632 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 MGAMO43451 1857 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 TNPO2O14787 897 aaKnown RBP10.04□□□□□ -0.8
CUX1-206ENST00000437600 MSCO60682 206 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 ERLIN2O94905 339 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 ECEL1O95672 775 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 LGALS2P05162 132 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 CHN1P15882 459 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 PLCB3Q01970 1234 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 GRB14Q14449 540 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 PSMD6Q15008 389 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 RUFY4Q6ZNE9 571 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 GSTA5Q7RTV2 222 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 USP37Q86T82 979 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 LRRN4Q8WUT4 740 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 TFAP2BQ92481 460 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 MAML3Q96JK9 1138 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 POLIQ9UNA4 740 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 AKT3Q9Y243 479 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 CNTNAP2Q9UHC6 1331 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 GOLGA8MH3BSY2 632 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 MAPK13O15264 365 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 PRKCBP05771 671 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 CD19P15391 556 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 ITGA8P53708 1063 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 DHX34Q14147 1143 aaKnown RBP10.04□□□□□ -0.8
CUX1-206ENST00000437600 EMC1Q8N766 993 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 HVCN1Q96D96 273 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 SCLT1Q96NL6 688 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 MCEEQ96PE7 176 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 TXLNGYQ9BZA5 131 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 AAASQ9NRG9 546 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 CREBZFQ9NS37 354 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 UVRAGQ9P2Y5 699 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 PCYOX1Q9UHG3 505 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 RASAL2Q9UJF2 1139 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 A0A087WZ62 844 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 GMNCA6NCL1 334 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 ASB14A6NK59 587 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 RGS16O15492 202 aaPredicted RBP10.04□□□□□ -0.8
CUX1-206ENST00000437600 MYCP01106 439 aaPredicted RBP10.04□□□□□ -0.8
CUX1-206ENST00000437600 IFNB1P01574 187 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 IBSPP21815 317 aaPredicted RBP10.04□□□□□ -0.8
CUX1-206ENST00000437600 RFC5P40937 340 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 TM4SF4P48230 202 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 OGDHQ02218 1023 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 CALCOCO2Q13137 446 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 NOGQ13253 232 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 MAPK6Q16659 721 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 CPLX4Q7Z7G2 160 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 ABRAQ8N0Z2 381 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 SHCBP1Q8NEM2 672 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 KAT2BQ92831 832 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 DDX27Q96GQ7 796 aaKnown RBP10.04□□□□□ -0.8
CUX1-206ENST00000437600 CPB2Q96IY4 423 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 PRMT1Q99873 361 aaKnown RBP10.04□□□□□ -0.8
CUX1-206ENST00000437600 FDXACB1Q9BRP7 624 aaPredicted RBP10.04□□□□□ -0.8
CUX1-206ENST00000437600 CDC42EP4Q9H3Q1 356 aaKnown RBP10.04□□□□□ -0.8
CUX1-206ENST00000437600 SMARCAD1Q9H4L7 1026 aa10.04□□□□□ -0.8
CUX1-206ENST00000437600 DIS3Q9Y2L1 958 aaKnown RBP10.04□□□□□ -0.8
CUX1-206ENST00000437600 RIPK2O43353 540 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 BANF1O75531 89 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 SMPD1P17405 629 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 HADHBP55084 474 aaKnown RBP10.03□□□□□ -0.8
CUX1-206ENST00000437600 NOMO3P69849 1222 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 TRIM32Q13049 653 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 WDR72Q3MJ13 1102 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 MAMDC4Q6UXC1 1216 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 LRIG3Q6UXM1 1119 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 MON1BQ7L1V2 547 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 FMNL3Q8IVF7 1028 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 ANKRD42Q8N9B4 389 aa10.03□□□□□ -0.8
CUX1-206ENST00000437600 FAM49AQ9H0Q0 323 aaPredicted RBP10.03□□□□□ -0.8
CUX1-206ENST00000437600 ERAP1Q9NZ08 941 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms