RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 RASAL2Q9UJF2 1139 aa27.3■■□□□ 1.96
CPNE1-216ENST00000437340 FSCN2O14926 492 aa27.29■■□□□ 1.96
CPNE1-216ENST00000437340 TLR3O15455 904 aaKnown RBP27.29■■□□□ 1.96
CPNE1-216ENST00000437340 PSTPIP1O43586 416 aa27.29■■□□□ 1.96
CPNE1-216ENST00000437340 HSF2BPO75031 334 aa27.29■■□□□ 1.96
CPNE1-216ENST00000437340 LLGL2Q6P1M3 1020 aa27.29■■□□□ 1.96
CPNE1-216ENST00000437340 C12orf50Q8NA57 414 aaPredicted RBP27.29■■□□□ 1.96
CPNE1-216ENST00000437340 MAIP1Q8WWC4 291 aa27.29■■□□□ 1.96
CPNE1-216ENST00000437340 TFAP2BQ92481 460 aa27.29■■□□□ 1.96
CPNE1-216ENST00000437340 PLEKHA5Q9HAU0 1116 aa27.29■■□□□ 1.96
CPNE1-216ENST00000437340 VPS18Q9P253 973 aa27.29■■□□□ 1.96
CPNE1-216ENST00000437340 HAS3O00219 553 aa27.28■■□□□ 1.96
CPNE1-216ENST00000437340 SSTR3P32745 418 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-216ENST00000437340 HSPA9P38646 679 aaKnown RBP27.28■■□□□ 1.96
CPNE1-216ENST00000437340 DRG2P55039 364 aaKnown RBP27.28■■□□□ 1.96
CPNE1-216ENST00000437340 TAP1Q03518 808 aa27.28■■□□□ 1.96
CPNE1-216ENST00000437340 MFSD10Q14728 455 aa27.28■■□□□ 1.96
CPNE1-216ENST00000437340 PHLDB2Q86SQ0 1253 aa27.28■■□□□ 1.96
CPNE1-216ENST00000437340 C1orf131Q8NDD1 294 aaKnown RBP27.28■■□□□ 1.96
CPNE1-216ENST00000437340 MAGOHBQ96A72 148 aaKnown RBP27.28■■□□□ 1.96
CPNE1-216ENST00000437340 ERP44Q9BS26 406 aa27.28■■□□□ 1.96
CPNE1-216ENST00000437340 IP6K2Q9UHH9 426 aa27.28■■□□□ 1.96
CPNE1-216ENST00000437340 FAN1Q9Y2M0 1017 aa27.28■■□□□ 1.96
CPNE1-216ENST00000437340 DERAQ9Y315 318 aa27.28■■□□□ 1.96
CPNE1-216ENST00000437340 GUCY2FP51841 1108 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 ADAM17P78536 824 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 RBP5P82980 135 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 RHOT1Q8IXI2 618 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 ZDHHC14Q8IZN3 488 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 TTC39CQ8N584 583 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 DDX27Q96GQ7 796 aaKnown RBP27.27■■□□□ 1.96
CPNE1-216ENST00000437340 FAM49AQ9H0Q0 323 aaPredicted RBP27.27■■□□□ 1.96
CPNE1-216ENST00000437340 TCRBV5S1A1TA0A578 114 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 DAPK3O43293 454 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 OPA1O60313 960 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 RNF40O75150 1001 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 CYP2C9P11712 490 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 HOXA11P31270 313 aaPredicted RBP27.27■■□□□ 1.96
CPNE1-216ENST00000437340 FNTAP49354 379 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 FLT3LGP49771 235 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 PSEN2P49810 448 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 PRKCZQ05513 592 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 DUPD1Q68J44 220 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 SLC27A1Q6PCB7 646 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 LRRC45Q96CN5 670 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 HPDLQ96IR7 371 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 SH3GL2Q99962 352 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 ADAM21Q9UKJ8 722 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 STRIP2Q9ULQ0 834 aa27.27■■□□□ 1.96
CPNE1-216ENST00000437340 TMEM191CA6NGB0 347 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 PODXLO00592 558 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 CILPO75339 1184 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 POLR2BP30876 1174 aaKnown RBP27.26■■□□□ 1.95
CPNE1-216ENST00000437340 RAD23BP54727 409 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 SIX1Q15475 284 aaPredicted RBP27.26■■□□□ 1.95
CPNE1-216ENST00000437340 CATSPER4Q7RTX7 472 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 ERICH1Q86X53 443 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 DDX42Q86XP3 938 aaKnown RBP eCLIP27.26■■□□□ 1.95
CPNE1-216ENST00000437340 JAMLQ86YT9 394 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 IQCKQ8N0W5 287 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 WDTC1Q8N5D0 677 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 EXOC4Q96A65 974 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 RUFY1Q96T51 708 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 AP5M1Q9H0R1 490 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 DPP3Q9NY33 737 aa27.26■■□□□ 1.95
CPNE1-216ENST00000437340 DARSP14868 501 aaKnown RBP27.25■■□□□ 1.95
CPNE1-216ENST00000437340 PTGIRP43119 386 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 NOTUMQ6P988 496 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 CCDC137Q6PK04 289 aaKnown RBP27.25■■□□□ 1.95
CPNE1-216ENST00000437340 KATNAL1Q9BW62 490 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 SDCBP2Q9H190 292 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 LRRC19Q9H756 370 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 SMYD3Q9H7B4 428 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 AGAP1Q9UPQ3 857 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 RARAP10276 462 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 AXLP30530 894 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 GBP1P32455 592 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 RAP1GAPP47736 663 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 DMTNQ08495 405 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 CFAP58Q5T655 872 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 DNAJC24Q6P3W2 148 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 KATNAL2Q8IYT4 538 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 GOLGA6L1Q8N7Z2 621 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 TRIB2Q92519 343 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 C18orf8Q96DM3 657 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 TRIM51Q9BSJ1 452 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 PSD3Q9NYI0 1048 aa27.25■■□□□ 1.95
CPNE1-216ENST00000437340 NPTXRO95502 500 aa27.24■■□□□ 1.95
CPNE1-216ENST00000437340 CD19P15391 556 aa27.24■■□□□ 1.95
CPNE1-216ENST00000437340 FGFR4P22455 802 aa27.24■■□□□ 1.95
CPNE1-216ENST00000437340 COILP38432 576 aaPredicted RBP27.24■■□□□ 1.95
CPNE1-216ENST00000437340 CDH8P55286 799 aa27.24■■□□□ 1.95
CPNE1-216ENST00000437340 SLC4A11Q8NBS3 891 aa27.24■■□□□ 1.95
CPNE1-216ENST00000437340 C3orf20Q8ND61 904 aa27.24■■□□□ 1.95
CPNE1-216ENST00000437340 LENG1Q96BZ8 264 aaPredicted RBP27.24■■□□□ 1.95
CPNE1-216ENST00000437340 KIF12Q96FN5 646 aa27.24■■□□□ 1.95
CPNE1-216ENST00000437340 TMEM176AQ96HP8 235 aa27.24■■□□□ 1.95
CPNE1-216ENST00000437340 GOLGA8KD6RF30 607 aa27.23■■□□□ 1.95
CPNE1-216ENST00000437340 PTPN11Q06124 597 aaPredicted RBP27.23■■□□□ 1.95
CPNE1-216ENST00000437340 INCA1Q0VD86 236 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms