RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 CYP3A7P24462 503 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 AKAP17AQ02040 695 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 PPP2R5DQ14738 602 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 LIN9Q5TKA1 542 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 LAIR1Q6GTX8 287 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 FUT10Q6P4F1 479 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 ZNF852Q6ZMS4 543 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 ANO5Q75V66 913 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 RTL10Q7L3V2 364 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 KRTAP1-3Q8IUG1 177 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 HACE1Q8IYU2 909 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 TMEM130Q8N3G9 435 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 CELF5Q8N6W0 485 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 GALNT11Q8NCW6 608 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 TCP11Q8WWU5 503 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 PRPF31Q8WWY3 499 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 FGF13Q92913 245 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 GAD1Q99259 594 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 IER2Q9BTL4 223 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 PHF20Q9BVI0 1012 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 GPR62Q9BZJ7 368 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 DHX33Q9H6R0 707 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 MINDY3Q9H8M7 445 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 SRA1Q9HD15 236 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 FBXW11Q9UKB1 542 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 ADAM28Q9UKQ2 775 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 RAB23Q9ULC3 237 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 KCNH3Q9ULD8 1083 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 GIT1Q9Y2X7 761 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 MTF2Q9Y483 593 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 IPPQ9Y573 584 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 TMEM150BA6NC51 233 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 F8W735 103 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 ADAMTS3O15072 1205 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 EDIL3O43854 480 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 ECI2O75521 394 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 ERLIN2O94905 339 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 RETP07949 1114 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 MLH1P40692 756 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 SCNN1GP51170 649 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 ADCY1Q08828 1119 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 LAMTOR4Q0VGL1 99 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 KRT32Q14532 448 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 UVSSAQ2YD98 709 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 TTC39BQ5VTQ0 682 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 NOTUMQ6P988 496 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 PDXDC1Q6P996 788 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 MOXD1Q6UVY6 613 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 Q6ZS46 218 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 GRASPQ7Z6J2 395 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 CACTIN-AS1Q8N1I8 211 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 CEP120Q8N960 986 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 DDX1Q92499 740 aaKnown RBP9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 CHAMP1Q96JM3 812 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 SH2D3AQ9BRG2 576 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 MRPL18Q9H0U6 180 aaKnown RBP9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 CSRNP2Q9H175 543 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 RASSF4Q9H2L5 321 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 CNTN3Q9P232 1028 aa9.33□□□□□ -0.92
NIF3L1-208ENST00000436412 SF3B1O75533 1304 aaKnown RBP eCLIP9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 F8W810 466 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 MAN2B1O00754 1011 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 TADA2AO75478 443 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 P4HBP07237 508 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 RPL17P18621 184 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 QARSP47897 775 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 PTENP60484 403 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 FGD1P98174 961 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 POU5F1BQ06416 359 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 ELAVL2Q12926 359 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 GRIK3Q13003 919 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 MXD4Q14582 209 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 PPM1JQ5JR12 505 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 PPM1LQ5SGD2 360 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 FERMT3Q86UX7 667 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 MAP4K3Q8IVH8 894 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 RNF149Q8NC42 400 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 ETNPPLQ8TBG4 499 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 DNASE1L2Q92874 299 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 TMEM143Q96AN5 459 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 CEP170P1Q96L14 293 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 B3GALT6Q96L58 329 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 TTPALQ9BTX7 342 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 EIF2AQ9BY44 585 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 TRIM6Q9C030 488 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 AKTIPQ9H8T0 292 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 ANO2Q9NQ90 1003 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 SH3GLB2Q9NR46 395 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 MIOSQ9NXC5 875 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 GDE1Q9NZC3 331 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 NAP1L2Q9ULW6 460 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 LAMA1P25391 3075 aa9.32□□□□□ -0.92
NIF3L1-208ENST00000436412 NOTCH4Q99466 2003 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 TSPAN1O60635 241 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 C8AP07357 584 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 CD72P21854 359 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 NPEPPSP55786 919 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 MTAPQ13126 283 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 PPP2R5CQ13362 524 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 FZD5Q13467 585 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms