RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 NR2F6P10588 404 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 EZH2Q15910 746 aaKnown RBP5.06□□□□□ -1.6
PTPN4-205ENST00000433888 SRSF7Q16629 238 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTPN4-205ENST00000433888 CCDC93Q567U6 631 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 PPP4R3AQ6IN85 833 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 GADL1Q6ZQY3 521 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 NECAB2Q7Z6G3 386 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 FAM109AQ8N4B1 249 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 AOPEPQ8N6M6 819 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 VGLL2Q8N8G2 317 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 MKS1Q9NXB0 559 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 DKK3Q9UBP4 350 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 SERPINB13Q9UIV8 391 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 PADI4Q9UM07 663 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 KLHL33A6NCF5 533 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 POLRMTO00411 1230 aaKnown RBP5.05□□□□□ -1.6
PTPN4-205ENST00000433888 TP73O15350 636 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 MALP21145 153 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 DRD4P21917 467 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 NDUFV1P49821 464 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 TOB1P50616 345 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-205ENST00000433888 TCF15Q12870 199 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 SLC10A2Q12908 348 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-205ENST00000433888 MAPK7Q13164 816 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 HABP2Q14520 560 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-205ENST00000433888 FAM153CQ494X1 144 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 KHDC1Q4VXA5 237 aaKnown RBP5.05□□□□□ -1.6
PTPN4-205ENST00000433888 SLC30A10Q6XR72 485 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 CAMKK1Q8N5S9 505 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 ZNF366Q8N895 744 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 VRK1Q99986 396 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-205ENST00000433888 ALG8Q9BVK2 526 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 SMOC2Q9H3U7 446 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 GPR35Q9HC97 309 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 EHD3Q9NZN3 535 aa5.05□□□□□ -1.6
PTPN4-205ENST00000433888 TARM1B6A8C7 271 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 TRIAP1O43715 76 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 MT-CO1P00395 513 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 HNRNPCP07910 306 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTPN4-205ENST00000433888 PRR35P0CG20 571 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 JUPP14923 745 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 CYP2C19P33261 490 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 CCT8P50990 548 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 FXR1P51114 621 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTPN4-205ENST00000433888 KRT85P78386 507 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 ACAP2Q15057 778 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 EGFLAMQ63HQ2 1017 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 TAF2Q6P1X5 1199 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 REPS1Q96D71 796 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 TEKT5Q96M29 485 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 RLIMQ9NVW2 624 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 AGAP1Q9UPQ3 857 aa5.04□□□□□ -1.6
PTPN4-205ENST00000433888 ZFXP17010 805 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-205ENST00000433888 KIF23Q02241 960 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-205ENST00000433888 GRM1Q13255 1194 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 BMPR2Q13873 1038 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 PCBP2Q15366 365 aaKnown RBP eCLIP5.03□□□□□ -1.6
PTPN4-205ENST00000433888 PROSER3Q2NL68 480 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 SLC44A4Q53GD3 710 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 MTX3Q5HYI7 312 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 SYDE2Q5VT97 1194 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 ZNF626Q68DY1 528 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 SUMO4Q6EEV6 95 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 TTC7BQ86TV6 843 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 PSD4Q8NDX1 1056 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 TPSD1Q9BZJ3 242 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 TMX1Q9H3N1 280 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 BRD9Q9H8M2 597 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 SERHLQ9NQF3 203 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 MCM8Q9UJA3 840 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 BTBD3Q9Y2F9 522 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 NR2E3Q9Y5X4 410 aa5.03□□□□□ -1.6
PTPN4-205ENST00000433888 CFAP20Q9Y6A4 193 aaKnown RBP5.03□□□□□ -1.6
PTPN4-205ENST00000433888 ZNF785A8K8V0 405 aa5.02□□□□□ -1.61
PTPN4-205ENST00000433888 ZNF213O14771 459 aa5.02□□□□□ -1.61
PTPN4-205ENST00000433888 SOAT2O75908 522 aa5.02□□□□□ -1.61
PTPN4-205ENST00000433888 CLSTN1O94985 981 aa5.02□□□□□ -1.61
PTPN4-205ENST00000433888 GJB1P08034 283 aa5.02□□□□□ -1.61
PTPN4-205ENST00000433888 NHLRC4P0CG21 123 aaPredicted RBP5.02□□□□□ -1.61
PTPN4-205ENST00000433888 PSMC1P62191 440 aaKnown RBP5.02□□□□□ -1.61
PTPN4-205ENST00000433888 SLC4A10Q6U841 1118 aa5.02□□□□□ -1.61
PTPN4-205ENST00000433888 PPP1R32Q7Z5V6 425 aa5.02□□□□□ -1.61
PTPN4-205ENST00000433888 FKBP10Q96AY3 582 aa5.02□□□□□ -1.61
PTPN4-205ENST00000433888 ACTRT3Q9BYD9 372 aa5.02□□□□□ -1.61
PTPN4-205ENST00000433888 SEMA4CQ9C0C4 833 aa5.02□□□□□ -1.61
PTPN4-205ENST00000433888 TRHDEQ9UKU6 1024 aa5.02□□□□□ -1.61
PTPN4-205ENST00000433888 GABRDO14764 452 aa5.01□□□□□ -1.61
PTPN4-205ENST00000433888 CHEK2O96017 543 aa5.01□□□□□ -1.61
PTPN4-205ENST00000433888 KIF22Q14807 665 aa5.01□□□□□ -1.61
PTPN4-205ENST00000433888 ODF1Q14990 250 aa5.01□□□□□ -1.61
PTPN4-205ENST00000433888 ABCB5Q2M3G0 1257 aa5.01□□□□□ -1.61
PTPN4-205ENST00000433888 TMEM119Q4V9L6 283 aa5.01□□□□□ -1.61
PTPN4-205ENST00000433888 RBM20Q5T481 1227 aaKnown RBP5.01□□□□□ -1.61
PTPN4-205ENST00000433888 ZNF66Q6ZN08 573 aa5.01□□□□□ -1.61
PTPN4-205ENST00000433888 ZNF551Q7Z340 670 aaPredicted RBP5.01□□□□□ -1.61
PTPN4-205ENST00000433888 FAM90A1Q86YD7 464 aa5.01□□□□□ -1.61
PTPN4-205ENST00000433888 FAM136AQ96C01 138 aa5.01□□□□□ -1.61
PTPN4-205ENST00000433888 CNPPD1Q9BV87 410 aa5.01□□□□□ -1.61
PTPN4-205ENST00000433888 MAN1C1Q9NR34 630 aa5.01□□□□□ -1.61
PTPN4-205ENST00000433888 ATP8A1Q9Y2Q0 1164 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms