RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 ALKAL1Q6UXT8 129 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 FAM228AQ86W67 206 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 WDTC1Q8N5D0 677 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 WNT8BQ93098 351 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 TMEM176AQ96HP8 235 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 RNF39Q9H2S5 420 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 CNTN3Q9P232 1028 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 CDY2AQ9Y6F7 541 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 SCINQ9Y6U3 715 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 CCDC66A2RUB6 948 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 ZSCAN5CA6NGD5 496 aaPredicted RBP16.1■□□□□ 0.17
SF1-209ENST00000433274 MED7O43513 233 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 ASGR1P07306 291 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 CBX1P83916 185 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 PTPN11Q06124 597 aaPredicted RBP16.1■□□□□ 0.17
SF1-209ENST00000433274 ZBTB6Q15916 424 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 KCNA10Q16322 511 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 MAP9Q49MG5 647 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 BEST2Q8NFU1 509 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 ZNF518BQ9C0D4 1074 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 PARVAQ9NVD7 372 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 NR2E1Q9Y466 385 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 PCDHA3Q9Y5H8 950 aa16.1■□□□□ 0.17
SF1-209ENST00000433274 TRIP11Q15643 1979 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 CCDC188H7C350 402 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 SART1O43290 800 aaKnown RBP16.09■□□□□ 0.17
SF1-209ENST00000433274 TRPA1O75762 1119 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 STAU1O95793 577 aaKnown RBP16.09■□□□□ 0.17
SF1-209ENST00000433274 CALB1P05937 261 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 PYGMP11217 842 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 CTNNA2P26232 953 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 GUCY2DQ02846 1103 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 DAB2IPQ5VWQ8 1189 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 TWF2Q6IBS0 349 aaKnown RBP16.09■□□□□ 0.17
SF1-209ENST00000433274 DPH6Q7L8W6 267 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 HDXQ7Z353 690 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 ERICH1Q86X53 443 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 RUBCNQ92622 972 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 GDAP1L1Q96MZ0 367 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 NAP1L3Q99457 506 aaPredicted RBP16.09■□□□□ 0.17
SF1-209ENST00000433274 SCN10AQ9Y5Y9 1956 aa16.09■□□□□ 0.17
SF1-209ENST00000433274 ESYT3A0FGR9 886 aa16.08■□□□□ 0.17
SF1-209ENST00000433274 TLR3O15455 904 aaKnown RBP16.08■□□□□ 0.17
SF1-209ENST00000433274 CDH5P33151 784 aaPredicted RBP16.08■□□□□ 0.17
SF1-209ENST00000433274 TNNT3P45378 269 aaPredicted RBP16.08■□□□□ 0.17
SF1-209ENST00000433274 NDST1P52848 882 aa16.08■□□□□ 0.17
SF1-209ENST00000433274 SEL1L2Q5TEA6 688 aa16.08■□□□□ 0.17
SF1-209ENST00000433274 RSPH3Q86UC2 560 aa16.08■□□□□ 0.17
SF1-209ENST00000433274 HEXIM2Q96MH2 286 aaKnown RBP16.08■□□□□ 0.17
SF1-209ENST00000433274 EPB41L5Q9HCM4 733 aa16.08■□□□□ 0.17
SF1-209ENST00000433274 FAM53CQ9NYF3 392 aa16.08■□□□□ 0.17
SF1-209ENST00000433274 BARX2Q9UMQ3 279 aaPredicted RBP16.08■□□□□ 0.17
SF1-209ENST00000433274 IPPQ9Y573 584 aa16.08■□□□□ 0.17
SF1-209ENST00000433274 SNX9Q9Y5X1 595 aa16.08■□□□□ 0.17
SF1-209ENST00000433274 SMIM28A0A1B0GU29 152 aa16.08■□□□□ 0.16
SF1-209ENST00000433274 PROSCO94903 275 aa16.08■□□□□ 0.16
SF1-209ENST00000433274 RWDD2BP57060 319 aa16.08■□□□□ 0.16
SF1-209ENST00000433274 GLIPR1L2Q4G1C9 344 aa16.08■□□□□ 0.16
SF1-209ENST00000433274 CYP4A22Q5TCH4 519 aa16.08■□□□□ 0.16
SF1-209ENST00000433274 SMYD5Q6GMV2 418 aa16.08■□□□□ 0.16
SF1-209ENST00000433274 CD99L2Q8TCZ2 262 aa16.08■□□□□ 0.16
SF1-209ENST00000433274 TRPV2Q9Y5S1 764 aa16.08■□□□□ 0.16
SF1-209ENST00000433274 HTTP42858 3142 aa16.08■□□□□ 0.16
SF1-209ENST00000433274 A0A0U1RQG5 324 aaPredicted RBP16.07■□□□□ 0.16
SF1-209ENST00000433274 SLC1A1P43005 524 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 RPL7AP62424 266 aaKnown RBP16.07■□□□□ 0.16
SF1-209ENST00000433274 NKX3-2P78367 333 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 INCA1Q0VD86 236 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 NFX1Q12986 1120 aaKnown RBP16.07■□□□□ 0.16
SF1-209ENST00000433274 KCTD19Q17RG1 926 aaPredicted RBP16.07■□□□□ 0.16
SF1-209ENST00000433274 DNAJC24Q6P3W2 148 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 SERINC5Q86VE9 423 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 SESTD1Q86VW0 696 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 IFT20Q8IY31 132 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 KRT222Q8N1A0 295 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 SMG8Q8ND04 991 aaKnown RBP16.07■□□□□ 0.16
SF1-209ENST00000433274 FEZF2Q8TBJ5 459 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 AMACRQ9UHK6 382 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 CYTH4Q9UIA0 394 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 UBQLN1Q9UMX0 589 aaKnown RBP16.07■□□□□ 0.16
SF1-209ENST00000433274 RALGAPA2Q2PPJ7 1873 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 GOLGA6L10A0A0M3HER8 536 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 MAP2K7O14733 419 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 RPS6KA5O75582 802 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 PLA2G4AP47712 749 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 CASP8Q14790 479 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 PTPN20Q4JDL3 420 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 C9orf57Q5W0N0 161 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 ZBTB9Q96C00 473 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 LHX5Q9H2C1 402 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 ERVK-5Q9HDB9 667 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 SRRDQ9UH36 339 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 USTQ9Y2C2 406 aa16.07■□□□□ 0.16
SF1-209ENST00000433274 M0QYV0 167 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 MICAL2O94851 1124 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 LLGL1Q15334 1064 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 CLUL1Q15846 466 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 REM2Q8IYK8 340 aaPredicted RBP16.06■□□□□ 0.16
SF1-209ENST00000433274 ARRDC4Q8NCT1 418 aa16.06■□□□□ 0.16
SF1-209ENST00000433274 KLHDC9Q8NEP7 349 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms