RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 STAT4Q14765 748 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 CCNG2Q16589 344 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 HSDL1Q3SXM5 330 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 KAZNQ674X7 775 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 SPOPLQ6IQ16 392 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 PPP1R21Q6ZMI0 780 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 SAMD3Q8N6K7 520 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 AGAP11Q8TF27 550 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 PRCCQ92733 491 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-206ENST00000433118 SLC10A4Q96EP9 437 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 PITPNM3Q9BZ71 974 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 ADAM22Q9P0K1 906 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 EXOC1LA0A1B0GW35 172 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 PSTPIP1O43586 416 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 ZC3H11AO75152 810 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMPD4-206ENST00000433118 KRT16P08779 473 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 BPIFB4P59827 614 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 ZNF677Q86XU0 584 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 CCHCR1Q8TD31 782 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 THOC1Q96FV9 657 aaKnown RBP11.15□□□□□ -0.62
SMPD4-206ENST00000433118 RSRC1Q96IZ7 334 aaKnown RBP11.15□□□□□ -0.62
SMPD4-206ENST00000433118 PPP1R16BQ96T49 567 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 PDGFCQ9NRA1 345 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 LGALS13Q9UHV8 139 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 TRIM33Q9UPN9 1127 aa11.15□□□□□ -0.62
SMPD4-206ENST00000433118 UMODL1Q5DID0 1318 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 ATF7P17544 494 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 TCF7P36402 384 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 MAGEA4P43358 317 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 IL9RQ01113 521 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 KCTD2Q14681 263 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 EMC2Q15006 297 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 BRDTQ58F21 947 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 HP1BP3Q5SSJ5 553 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 CAPN12Q6ZSI9 719 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 MON1BQ7L1V2 547 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 NSMCE1Q8WV22 266 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 TRAPPC12Q8WVT3 735 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 ZBTB45Q96K62 511 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 MRPL47Q9HD33 250 aaKnown RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 SAYSD1Q9NPB0 183 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 ANKFY1Q9P2R3 1169 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 AGTPBP1Q9UPW5 1226 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 FAM47DPA6NHR8 397 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 A8MUI8 341 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 PI4K2BG5E9Z4 385 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 TLR3O15455 904 aaKnown RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 SPAG7O75391 227 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 ANP32DO95626 131 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 HLA-DRAP01903 254 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 CFHP08603 1231 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 LIG4P49917 911 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 TMEM270Q6UE05 265 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 USP50Q70EL3 339 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 DNERQ8NFT8 737 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 ZNF516Q92618 1163 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 MYH9P35579 1960 aaKnown RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 DICER1Q9UPY3 1922 aaKnown RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 POC1B-GALNT4F8VUJ3 575 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 DGAT1O75907 488 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 FARP2O94887 1054 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 CYP1A1P04798 512 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 GJB1P08034 283 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 GNA15P30679 374 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 CETN2P41208 172 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 ACOT2P49753 483 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 MTFR1Q15390 333 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 XKR3Q5GH77 459 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 CGB2Q6NT52 195 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 LRRC71Q8N4P6 559 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 MRRFQ96E11 262 aaKnown RBP11.14□□□□□ -0.63
SMPD4-206ENST00000433118 MMP19Q99542 508 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 PRKAG3Q9UGI9 489 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 FBXO40Q9UH90 709 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 ZNF148Q9UQR1 794 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 NEU2Q9Y3R4 380 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 PCDHB4Q9Y5E5 795 aa11.14□□□□□ -0.63
SMPD4-206ENST00000433118 MCM3APO60318 1980 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 GLTPD2A6NH11 291 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 NOP56O00567 594 aaKnown RBP11.13□□□□□ -0.63
SMPD4-206ENST00000433118 KRT10P13645 584 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 KRT15P19012 456 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 GARTP22102 1010 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 MSH2P43246 934 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 MCCD1P59942 119 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-206ENST00000433118 PTP4A2Q12974 167 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 MAMLD1Q13495 774 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 NAA25Q14CX7 972 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 KATNAL2Q8IYT4 538 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 ASAP3Q8TDY4 903 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 FBF1Q8TES7 1133 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 PPP1R13LQ8WUF5 828 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 CFAP57Q96MR6 1250 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 PCYT2Q99447 389 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 NTPCRQ9BSD7 190 aaKnown RBP11.13□□□□□ -0.63
SMPD4-206ENST00000433118 A0A1B0GUA9 196 aa11.13□□□□□ -0.63
SMPD4-206ENST00000433118 CXCL11O14625 94 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms