RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 VHLP40337 213 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 GSSP48637 474 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 KRT76Q01546 638 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 GOLGA7BQ2TAP0 167 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 DALRD3Q5D0E6 543 aaKnown RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 TLK2Q86UE8 772 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 SPATA18Q8TC71 538 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 GFM2Q969S9 779 aaKnown RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 DNAJC7Q99615 494 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 ROGDIQ9GZN7 287 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 MLNP12872 115 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 TTLL4Q14679 1199 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 TRIM72Q6ZMU5 477 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 PCYOX1LQ8NBM8 494 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 RBBP8NLQ8NC74 664 aaPredicted RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 ECSITQ9BQ95 431 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 KCTD10Q9H3F6 313 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 CYP4F12Q9HCS2 524 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 DCP1AQ9NPI6 582 aaPredicted RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 BLOC1S6Q9UL45 172 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 MEI4A8MW99 385 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 RHOBTB1O94844 696 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 KLHL2O95198 593 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 SPP2Q13103 211 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 DDX39BQ13838 428 aaKnown RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 SLC18A3Q16572 532 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 TRMT2AQ8IZ69 625 aaKnown RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 GIMAP8Q8ND71 665 aaPredicted RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 C2orf40Q9H1Z8 148 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 SEPT3Q9UH03 358 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 SPTLC1O15269 473 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 STRNO43815 780 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 TOMM70O94826 608 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 SLC1A1P43005 524 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 WLSQ5T9L3 541 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 PGBD3Q8N328 593 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 MAGED4Q96JG8 741 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 RPAP3Q9H6T3 665 aaPredicted RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 SNX13Q9Y5W8 968 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 ITIH2P19823 946 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 TAP1Q03518 808 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 NFIL3Q16649 462 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 PLEKHA7Q6IQ23 1121 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 POTEAQ6S8J7 498 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 FOXP4Q8IVH2 680 aaPredicted RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 ARID3BQ8IVW6 561 aaPredicted RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 YAF2Q8IY57 180 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 DDHD1Q8NEL9 900 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 CASKIN2Q8WXE0 1202 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 USP13Q92995 863 aaPredicted RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 FAM20AQ96MK3 541 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 ARHGEF3Q9NR81 526 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 PHTF1Q9UMS5 762 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 PRG3Q9Y2Y8 225 aaPredicted RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 ABCA5Q8WWZ7 1642 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 ARL4DP49703 201 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 ATP2C1P98194 919 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-206ENST00000431893 MAPK11Q15759 364 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 MKNK1Q9BUB5 465 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 HEY2Q9UBP5 337 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 PLEKP08567 350 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-206ENST00000431893 FEN1P39748 380 aaKnown RBP11.91□□□□□ -0.5
SEC16A-206ENST00000431893 IRAK1P51617 712 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 TRADDQ15628 312 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 TUBGCP3Q96CW5 907 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 PNKPQ96T60 521 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 FAM153AQ9UHL3 310 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 PFASO15067 1338 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 CPDO75976 1380 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 ASNSP08243 561 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 CHI3L1P36222 383 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-206ENST00000431893 HPCAP84074 193 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 SEZ6Q53EL9 994 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 CYB5D1Q6P9G0 228 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 ATG4AQ8WYN0 398 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 FOPNLQ96NB1 174 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 COA1Q9GZY4 146 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-206ENST00000431893 MINPP1Q9UNW1 487 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 RUVBL2Q9Y230 463 aaKnown RBP11.91□□□□□ -0.5
SEC16A-206ENST00000431893 SESN1Q9Y6P5 492 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 ATP6V1B2P21281 511 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 HSD17B3P37058 310 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 CSNK2BP67870 215 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 ZCWPW2Q504Y3 356 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 DCAF6Q58WW2 860 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 AGBL2Q5U5Z8 902 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 CENPLQ8N0S6 344 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-206ENST00000431893 TSPAN17Q96FV3 270 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 ARAP3Q8WWN8 1544 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 CLASP2O75122 1294 aaKnown RBP11.91□□□□□ -0.5
SEC16A-206ENST00000431893 CAPN1P07384 714 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 FMO5P49326 533 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 COPAP53621 1224 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 NCOA4Q13772 614 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 OASLQ15646 514 aaKnown RBP11.91□□□□□ -0.5
SEC16A-206ENST00000431893 DDI2Q5TDH0 399 aa11.91□□□□□ -0.5
SEC16A-206ENST00000431893 GUF1Q8N442 669 aaKnown RBP11.91□□□□□ -0.5
SEC16A-206ENST00000431893 ZNF614Q8N883 585 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms