RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 FAM213AQ9BRX8 229 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 MRPL44Q9H9J2 332 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 C2orf42Q9NWW7 574 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 ABI2Q9NYB9 513 aaPredicted RBP15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 GTSE1Q9NYZ3 720 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 NCDNQ9UBB6 729 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 A0A087X0B3 334 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 HCRTO43612 131 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 PRAMEF12O95522 483 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 ADRB2P07550 413 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 KPNA1P52294 538 aaPredicted RBP15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 TNK2Q07912 1038 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 DMWDQ09019 674 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 RESTQ13127 1097 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 SRSF5Q13243 272 aaKnown RBP15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 GAS6Q14393 721 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 RRAGBQ5VZM2 374 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 TXNDC11Q6PKC3 985 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 Q6ZS52 159 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 ZNF720Q7Z2F6 126 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 MFSD6LQ8IWD5 586 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 KCTD17Q8N5Z5 321 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 TTC16Q8NEE8 873 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 RUBCNQ92622 972 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 DNASE1L2Q92874 299 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 HPS3Q969F9 1004 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 OSBPL6Q9BZF3 934 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 CCSER1Q9C0I3 900 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 PCIF1Q9H4Z3 704 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 TMLHEQ9NVH6 421 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 FBXO4Q9UKT5 387 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 ANO9A1A5B4 782 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 ARNTLO00327 626 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 NCAM2O15394 837 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 MICAL2O94851 1124 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 GCNT3O95395 438 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 IDEP14735 1019 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 TYMPP19971 482 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 ACAT1P24752 427 aaKnown RBP15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 SATB1Q01826 763 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 LMBRD2Q68DH5 695 aaPredicted RBP15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 PDILTQ8N807 584 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 CSGALNACT1Q8TDX6 532 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 SEMA4AQ9H3S1 761 aa15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 MRPS17Q9Y2R5 130 aaKnown RBP15.41■□□□□ 0.06
SMARCE1-205ENST00000431889 NUP210Q8TEM1 1887 aaPredicted RBP15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 GPR179Q6PRD1 2367 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 ATG2BQ96BY7 2078 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 MED19A0JLT2 244 aaPredicted RBP15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 TFAMQ00059 246 aaKnown RBP15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 MYBPC2Q14324 1141 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 KYAT1Q16773 422 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 FOXD4L5Q5VV16 416 aaPredicted RBP15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 HEATR6Q6AI08 1181 aaKnown RBP15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 GLIS3Q8NEA6 775 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 FOXD4L4Q8WXT5 416 aaPredicted RBP15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 PSMG2Q969U7 264 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 NELL2Q99435 816 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 PI4K2AQ9BTU6 479 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 ZCWPW1Q9H0M4 648 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 ZSCAN32Q9NX65 697 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 SMG5Q9UPR3 1016 aaKnown RBP15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 F5P12259 2224 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 ZNF638Q14966 1978 aaKnown RBP15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 OTOGLQ3ZCN5 2332 aa15.4■□□□□ 0.06
SMARCE1-205ENST00000431889 MAN2B1O00754 1011 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 PRPF6O94906 941 aaKnown RBP15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 BMP15O95972 392 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 ITGB3P05106 788 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 CHRNB1P11230 501 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 SYT1P21579 422 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 POLR2BP30876 1174 aaKnown RBP15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 RPS9P46781 194 aaKnown RBP15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 TAF6P49848 677 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 CUL4AQ13619 759 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 ZNF528Q3MIS6 628 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 METTL23Q86XA0 190 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 DEPDC1BQ8WUY9 529 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 DNAJC19Q96DA6 116 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 BORCS6Q96GS4 357 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 USP28Q96RU2 1077 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 TRPV4Q9HBA0 871 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 PRMT8Q9NR22 394 aaPredicted RBP15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 DAXXQ9UER7 740 aaPredicted RBP15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 CCDC39Q9UFE4 941 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 MAGED2Q9UNF1 606 aaPredicted RBP15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 AGAP1Q9UPQ3 857 aa15.39■□□□□ 0.05
SMARCE1-205ENST00000431889 KPNA7A9QM74 516 aa15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 DPYSL4O14531 572 aa15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 SLC26A4O43511 780 aa15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 PPP1R37O75864 691 aa15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 C1QBPQ07021 282 aaKnown RBP15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 PON2Q15165 354 aa15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 TAF12Q16514 161 aa15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 RSPO4Q2I0M5 234 aaPredicted RBP15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 FOXD4L6Q3SYB3 417 aaPredicted RBP15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 TRIM68Q6AZZ1 485 aa15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 SLFN12LQ6IEE8 588 aa15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 FOXD4L3Q6VB84 417 aaPredicted RBP15.38■□□□□ 0.05
SMARCE1-205ENST00000431889 PRR23BQ6ZRT6 265 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms