RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 MAGEA1P43355 309 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 CDR2Q01850 454 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 INCA1Q0VD86 236 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 TUSC3Q13454 348 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 TCTN1Q2MV58 587 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 KIAA1328Q86T90 577 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 GLYCTKQ8IVS8 523 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 URGCPQ8TCY9 931 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 SLC20A1Q8WUM9 679 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 RSPH1Q8WYR4 309 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 DDX1Q92499 740 aaKnown RBP19.46■□□□□ 0.71
HMGN1-206ENST00000431390 DDX27Q96GQ7 796 aaKnown RBP19.46■□□□□ 0.71
HMGN1-206ENST00000431390 UROC1Q96N76 676 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 PRDM12Q9H4Q4 367 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 KANSL3Q9P2N6 904 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 PCDHB7Q9Y5E2 793 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 SNX9Q9Y5X1 595 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 KPNA7A9QM74 516 aa19.45■□□□□ 0.7
HMGN1-206ENST00000431390 TNFRSF10AO00220 468 aa19.45■□□□□ 0.7
HMGN1-206ENST00000431390 POMCP01189 267 aa19.45■□□□□ 0.7
HMGN1-206ENST00000431390 PAX3P23760 479 aa19.45■□□□□ 0.7
HMGN1-206ENST00000431390 CLLU1OSQ5K130 101 aa19.45■□□□□ 0.7
HMGN1-206ENST00000431390 RASIP1Q5U651 963 aa19.45■□□□□ 0.7
HMGN1-206ENST00000431390 ALKBH5Q6P6C2 394 aaKnown RBP19.45■□□□□ 0.7
HMGN1-206ENST00000431390 ZNF365Q70YC5 407 aa19.45■□□□□ 0.7
HMGN1-206ENST00000431390 DEFB128Q7Z7B8 93 aa19.45■□□□□ 0.7
HMGN1-206ENST00000431390 RPUSD2Q8IZ73 545 aaKnown RBP19.45■□□□□ 0.7
HMGN1-206ENST00000431390 TMEM199Q8N511 208 aa19.45■□□□□ 0.7
HMGN1-206ENST00000431390 MMS19Q96T76 1030 aa19.45■□□□□ 0.7
HMGN1-206ENST00000431390 INPP5FQ9Y2H2 1132 aa19.45■□□□□ 0.7
HMGN1-206ENST00000431390 PODXLO00592 558 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 HOXA2O43364 376 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 CILPO75339 1184 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 PAEPP09466 180 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 CHRNB2P17787 502 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 GNA15P30679 374 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 RAP1GAPP47736 663 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 CDH8P55286 799 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 LILRA4P59901 499 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 FMO1Q01740 532 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 NOMO2Q5JPE7 1267 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 CCDC122Q5T0U0 273 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 NYAP1Q6ZVC0 841 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 TSGA10Q9BZW7 698 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 ACP6Q9NPH0 428 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 LRFN2Q9ULH4 789 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 BARX2Q9UMQ3 279 aaPredicted RBP19.44■□□□□ 0.7
HMGN1-206ENST00000431390 MUC3AQ02505 3323 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.44■□□□□ 0.7
HMGN1-206ENST00000431390 PJA2O43164 708 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 FAM163BP0C2L3 166 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 CLCNKBP51801 687 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 IKBKEQ14164 716 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 UPP1Q16831 310 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 ARHGAP29Q52LW3 1261 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 PSRC1Q6PGN9 363 aaPredicted RBP19.44■□□□□ 0.7
HMGN1-206ENST00000431390 DPH6Q7L8W6 267 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 LIMS2Q7Z4I7 341 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 NPAS4Q8IUM7 802 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 CRIPAKQ8N1N5 446 aa19.44■□□□□ 0.7
HMGN1-206ENST00000431390 SPTLC1O15269 473 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 KRT86O43790 486 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 TACC1O75410 805 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 TUBB4AP04350 444 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 PFKMP08237 780 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 MMEP08473 750 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 FGFR1P11362 822 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 GZMAP12544 262 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 ARHGAP25P42331 645 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 TAF3Q5VWG9 929 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 TOP6BLQ8N6T0 577 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 WHAMMQ8TF30 809 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 VWCEQ96DN2 955 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 SEPT11Q9NVA2 429 aaKnown RBP19.43■□□□□ 0.7
HMGN1-206ENST00000431390 INTUQ9ULD6 942 aa19.43■□□□□ 0.7
HMGN1-206ENST00000431390 CASTOR2A6NHX0 329 aa19.42■□□□□ 0.7
HMGN1-206ENST00000431390 KIF2AO00139 706 aaPredicted RBP19.42■□□□□ 0.7
HMGN1-206ENST00000431390 RAD23BP54727 409 aa19.42■□□□□ 0.7
HMGN1-206ENST00000431390 DSC1Q08554 894 aa19.42■□□□□ 0.7
HMGN1-206ENST00000431390 KIF5AQ12840 1032 aa19.42■□□□□ 0.7
HMGN1-206ENST00000431390 PTPN14Q15678 1187 aa19.42■□□□□ 0.7
HMGN1-206ENST00000431390 SOWAHAQ2M3V2 549 aa19.42■□□□□ 0.7
HMGN1-206ENST00000431390 TRIM72Q6ZMU5 477 aa19.42■□□□□ 0.7
HMGN1-206ENST00000431390 UNC93AQ86WB7 457 aa19.42■□□□□ 0.7
HMGN1-206ENST00000431390 ABI1Q8IZP0 508 aa19.42■□□□□ 0.7
HMGN1-206ENST00000431390 APPL2Q8NEU8 664 aa19.42■□□□□ 0.7
HMGN1-206ENST00000431390 LZTFL1Q9NQ48 299 aa19.42■□□□□ 0.7
HMGN1-206ENST00000431390 RRAGDQ9NQL2 400 aaPredicted RBP19.42■□□□□ 0.7
HMGN1-206ENST00000431390 A0A0U1RQJ8 604 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 ABHD14A-ACY1A0A1B0GW23 586 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 RCCD1A6NED2 376 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 THAP12O43422 761 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 HUS1O60921 280 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 COL9A1P20849 921 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 AARSP49588 968 aaKnown RBP eCLIP19.41■□□□□ 0.7
HMGN1-206ENST00000431390 ADGRE1Q14246 886 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 ZNF394Q53GI3 561 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 SLC4A11Q8NBS3 891 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 ZNF606Q8WXB4 792 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 ATRIPQ8WXE1 791 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms