RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 RALAP11233 206 aa14.8□□□□□ -0.04
HOXC4-202ENST00000430889 CETPP11597 493 aa14.8□□□□□ -0.04
HOXC4-202ENST00000430889 RARGP13631 454 aa14.8□□□□□ -0.04
HOXC4-202ENST00000430889 PTPN7P35236 360 aa14.8□□□□□ -0.04
HOXC4-202ENST00000430889 ATP1A2P50993 1020 aa14.8□□□□□ -0.04
HOXC4-202ENST00000430889 YWHAEP62258 255 aaKnown RBP14.8□□□□□ -0.04
HOXC4-202ENST00000430889 CCNG2Q16589 344 aa14.8□□□□□ -0.04
HOXC4-202ENST00000430889 ANKRD23Q86SG2 305 aa14.8□□□□□ -0.04
HOXC4-202ENST00000430889 BRI3BPQ8WY22 251 aa14.8□□□□□ -0.04
HOXC4-202ENST00000430889 ATG4AQ8WYN0 398 aa14.8□□□□□ -0.04
HOXC4-202ENST00000430889 FDXACB1Q9BRP7 624 aaPredicted RBP14.8□□□□□ -0.04
HOXC4-202ENST00000430889 OSBPL8Q9BZF1 889 aa14.8□□□□□ -0.04
HOXC4-202ENST00000430889 MTRF1LQ9UGC7 380 aaKnown RBP14.8□□□□□ -0.04
HOXC4-202ENST00000430889 PTPN22Q9Y2R2 807 aa14.8□□□□□ -0.04
HOXC4-202ENST00000430889 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.79□□□□□ -0.04
HOXC4-202ENST00000430889 PAEPP09466 180 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 TCF4P15884 667 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 KCNA4P22459 653 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 MDH1P40925 334 aaKnown RBP14.79□□□□□ -0.04
HOXC4-202ENST00000430889 ADCYAP1R1P41586 468 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 GCLCP48506 637 aaPredicted RBP14.79□□□□□ -0.04
HOXC4-202ENST00000430889 RAD23BP54727 409 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 OSTNP61366 133 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 TNFAIP2Q03169 654 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 TAP1Q03518 808 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 GRB14Q14449 540 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 LLGL1Q15334 1064 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 DENND1BQ6P3S1 775 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 MTHFD1LQ6UB35 978 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 SCARA5Q6ZMJ2 495 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 TMEM130Q8N3G9 435 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 C3orf20Q8ND61 904 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 SEMA4AQ9H3S1 761 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 ASB7Q9H672 318 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 HOMER3Q9NSC5 361 aa14.79□□□□□ -0.04
HOXC4-202ENST00000430889 ZNF286BP0CG31 522 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 ARF4P18085 180 aaPredicted RBP14.78□□□□□ -0.04
HOXC4-202ENST00000430889 LSP1P33241 339 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 GTF2A2P52657 109 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 IGBP1P78318 339 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 GUCY1A3Q02108 690 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 SLMAPQ14BN4 828 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 SLC10A6Q3KNW5 377 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 PTPN20Q4JDL3 420 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 ZNF394Q53GI3 561 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 EAPPQ56P03 285 aaPredicted RBP14.78□□□□□ -0.04
HOXC4-202ENST00000430889 TNFAIP8L3Q5GJ75 292 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 MARCH8Q5T0T0 291 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 JADE1Q6IE81 842 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 DNAJC24Q6P3W2 148 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 ATL2Q8NHH9 583 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 GRK7Q8WTQ7 553 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 SLITRK1Q96PX8 696 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 CYTH4Q9UIA0 394 aa14.78□□□□□ -0.04
HOXC4-202ENST00000430889 IQCA1LA6NCM1 817 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 DCDC2CA8MYV0 355 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 RIPK2O43353 540 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 STAU1O95793 577 aaKnown RBP14.77□□□□□ -0.04
HOXC4-202ENST00000430889 ITIH2P19823 946 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 ATICP31939 592 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 RAP1GAPP47736 663 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 NFX1Q12986 1120 aaKnown RBP14.77□□□□□ -0.04
HOXC4-202ENST00000430889 SNX1Q13596 522 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 PTGISQ16647 500 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 KYAT1Q16773 422 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 KRT71Q3SY84 523 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 ZNF667Q5HYK9 610 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 DENND2CQ68D51 928 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 TTC19Q6DKK2 380 aaPredicted RBP14.77□□□□□ -0.04
HOXC4-202ENST00000430889 DRICH1Q6PGQ1 229 aaPredicted RBP14.77□□□□□ -0.04
HOXC4-202ENST00000430889 RCOR2Q8IZ40 523 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 ARFGAP2Q8N6H7 521 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 SLC4A11Q8NBS3 891 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 PGM2Q96G03 612 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 MCEEQ96PE7 176 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 TWNKQ96RR1 684 aa14.77□□□□□ -0.04
HOXC4-202ENST00000430889 CCL15-CCL14A0A0B4J2E2 113 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 TSPAN1O60635 241 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 CAND2O75155 1236 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 CILPO75339 1184 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 CSDE1O75534 798 aaKnown RBP14.77□□□□□ -0.05
HOXC4-202ENST00000430889 VTNP04004 478 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 COPS2P61201 443 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 PPP2R2AP63151 447 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 ADCY2Q08462 1091 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 PIGHQ14442 188 aaPredicted RBP14.77□□□□□ -0.05
HOXC4-202ENST00000430889 SLC29A2Q14542 456 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 PPP1R7Q15435 360 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 CCL15Q16663 113 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 DUSP28Q4G0W2 176 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 ATP13A4Q4VNC1 1196 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 PNMA8AQ86V59 439 aaPredicted RBP14.77□□□□□ -0.05
HOXC4-202ENST00000430889 HOOK3Q86VS8 718 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 BCAS4Q8TDM0 211 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 FNIP1Q8TF40 1166 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 SNF8Q96H20 258 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 CPB2Q96IY4 423 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 RBM41Q96IZ5 413 aaKnown RBP14.77□□□□□ -0.05
HOXC4-202ENST00000430889 HEMGNQ9BXL5 484 aa14.77□□□□□ -0.05
HOXC4-202ENST00000430889 ELOVL4Q9GZR5 314 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms