RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 GUF1Q8N442 669 aaKnown RBP10.56□□□□□ -0.72
HDAC6-207ENST00000430858 PDCL2Q8N4E4 241 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 TOP6BLQ8N6T0 577 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 ATAD1Q8NBU5 361 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 LEMD2Q8NC56 503 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 ENGASEQ8NFI3 743 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 ITFG1Q8TB96 612 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 C2orf15Q8WU43 125 aaKnown RBP10.56□□□□□ -0.72
HDAC6-207ENST00000430858 FGF13Q92913 245 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 CCDC127Q96BQ5 260 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 ASIC4Q96FT7 647 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 HPDLQ96IR7 371 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 ZNF512Q96ME7 567 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-207ENST00000430858 TMEM209Q96SK2 561 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 RTP3Q9BQQ7 232 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 ZCWPW1Q9H0M4 648 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 DMAC2Q9NW81 257 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 L1RE1Q9UN81 338 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 TRAF3IP3Q9Y228 551 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 MRPS23Q9Y3D9 190 aaKnown RBP10.56□□□□□ -0.72
HDAC6-207ENST00000430858 YIPF1Q9Y548 306 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 SNX9Q9Y5X1 595 aa10.56□□□□□ -0.72
HDAC6-207ENST00000430858 BDP1A6H8Y1 2624 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 ANK1P16157 1881 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 MICAL2O94851 1124 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 VNN2O95498 520 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 NR3C1P04150 777 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 LHX1P48742 406 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 TUFMP49411 452 aaKnown RBP10.55□□□□□ -0.72
HDAC6-207ENST00000430858 AP3M2P53677 418 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 EPHB3P54753 998 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 TSPY1Q01534 308 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 FAM160A1Q05DH4 1040 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 NFIL3Q16649 462 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 SLC39A12Q504Y0 691 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 CYP4A22Q5TCH4 519 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 SCARA3Q6AZY7 606 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 HFE2Q6ZVN8 426 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 MTSS1LQ765P7 747 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 PDZD4Q76G19 769 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-207ENST00000430858 NPAS3Q8IXF0 933 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 DCP1BQ8IZD4 617 aaKnown RBP10.55□□□□□ -0.72
HDAC6-207ENST00000430858 SPPL2BQ8TCT7 592 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 PBXIP1Q96AQ6 731 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 FAM84AQ96KN4 292 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 TIGD1Q96MW7 591 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 GSDMAQ96QA5 445 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 ACBD6Q9BR61 282 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 CORO1BQ9BR76 489 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 RMND1Q9NWS8 449 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 DDX43Q9NXZ2 648 aaKnown RBP10.55□□□□□ -0.72
HDAC6-207ENST00000430858 GDE1Q9NZC3 331 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 CEP72Q9P209 647 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 HOOK1Q9UJC3 728 aaKnown RBP10.55□□□□□ -0.72
HDAC6-207ENST00000430858 DUSP12Q9UNI6 340 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 FRMD4BQ9Y2L6 1034 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 HCN4Q9Y3Q4 1203 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 ASB3Q9Y575 518 aa10.55□□□□□ -0.72
HDAC6-207ENST00000430858 TCHHQ07283 1943 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 GABRDO14764 452 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 SMC2O95347 1197 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 CST3P01034 146 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-207ENST00000430858 PCSK1P29120 753 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 ATICP31939 592 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 SCN1AP35498 2009 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 EPHA5P54756 1037 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 CLDN10P78369 228 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 MYL7Q01449 175 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 TRPC3Q13507 836 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 PNOCQ13519 176 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 HTR4Q13639 388 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 NFE2Q16621 373 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-207ENST00000430858 SLC5A9Q2M3M2 681 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 SOWAHAQ2M3V2 549 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 MGAT5BQ3V5L5 792 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 PRSS36Q5K4E3 855 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 CEP135Q66GS9 1140 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 LRRTM3Q86VH5 581 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 ELOA2Q8IYF1 753 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-207ENST00000430858 ADGRF2Q8IZF7 708 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 SLC44A3Q8N4M1 653 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 PARD3BQ8TEW8 1205 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 RSAD2Q8WXG1 361 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 ZNF516Q92618 1163 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 GTPBP4Q9BZE4 634 aaKnown RBP10.54□□□□□ -0.72
HDAC6-207ENST00000430858 GZF1Q9H116 711 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-207ENST00000430858 CRISPLD1Q9H336 500 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 SMOC2Q9H3U7 446 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 ASAH2Q9NR71 780 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 SLC27A5Q9Y2P5 690 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 NUMBLQ9Y6R0 609 aa10.54□□□□□ -0.72
HDAC6-207ENST00000430858 LRRIQ3A6PVS8 624 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-207ENST00000430858 MAPK13O15264 365 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 PHACTR2O75167 634 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 STAU1O95793 577 aaKnown RBP10.53□□□□□ -0.72
HDAC6-207ENST00000430858 FAM163BP0C2L3 166 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 HAPLN1P10915 354 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-207ENST00000430858 SRFP11831 508 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 NR2F2P24468 414 aa10.53□□□□□ -0.72
HDAC6-207ENST00000430858 RPL13P26373 211 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms