RNA–Protein interactions for RNA: ENST00000430799.7

ARID1A-204, Transcript of AT-rich interaction domain 1A, human

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-204	ENST00000430799	C3orf20	Q8ND61	904 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	SHCBP1	Q8NEM2	672 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	ZNF473	Q8WTR7	871 aa	Known RBP	11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	KCNF1	Q9H3M0	494 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	TASP1	Q9H6P5	420 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	ANKRD65	E5RJM6	399 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	ZNF185	O15231	689 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	MSH4	O15457	936 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	CTDNEP1	O95476	244 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	FAM200B	P0CF97	657 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	GNL1	P36915	607 aa	Predicted RBP	11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	CPT1A	P50416	773 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	SLC26A2	P50443	739 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	KYNU	Q16719	465 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	ZNF484	Q5JVG2	852 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	LINC00116	Q8NCU8	138 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	VPS37A	Q8NEZ2	397 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	FAM32A	Q9Y421	112 aa	Known RBP	11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799		H0Y626	953 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	TRIM16	O95361	564 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	C16orf87	Q6PH81	154 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	SLC7A14	Q8TBB6	771 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	TMC2	Q8TDI7	906 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	DNAJC7	Q99615	494 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	PRMT1	Q99873	361 aa	Known RBP	11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	NUDT12	Q9BQG2	462 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	ZSWIM1	Q9BR11	485 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	SH2D3A	Q9BRG2	576 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	CCDC134	Q9H6E4	229 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	NAGPA	Q9UK23	515 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	FAM107A	O95990	144 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	COIL	P38432	576 aa	Predicted RBP	11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	CUL2	Q13617	745 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	PDIA6	Q15084	440 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	SERPINB12	Q96P63	405 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	OSBPL1A	Q9BXW6	950 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	CDV3	Q9UKY7	258 aa	Known RBP	11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799	CHMP2B	Q9UQN3	213 aa		11.44	□□□□□ -0.58
ARID1A-204	ENST00000430799		A0A0G2JLW4	131 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	GTPBP10	A4D1E9	387 aa	Known RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	PDGFRB	P09619	1106 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	KDSR	Q06136	332 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	MCL1	Q07820	350 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	ACAD10	Q6JQN1	1059 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	C3orf62	Q6ZUJ4	267 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	BATF3	Q9NR55	127 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	KLHL11	Q9NVR0	708 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	C5orf58	C9J3I9	102 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	GMPS	P49915	693 aa	Predicted RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	NLRP11	P59045	1033 aa	Known RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	LONRF1	Q17RB8	773 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	GID8	Q9NWU2	228 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	SUFU	Q9UMX1	484 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	TRAF3IP3	Q9Y228	551 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	AKT1	P31749	480 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	ITGA8	P53708	1063 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	C4orf33	Q8N1A6	199 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	ATXN7L3B	Q96GX2	97 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	MS4A14	Q96JA4	679 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	FAM49B	Q9NUQ9	324 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	APOA1	P02647	267 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	CTSH	P09668	335 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	PTPA	Q15257	358 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	IL31	Q6EBC2	164 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	TRIM65	Q6PJ69	517 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	CCL15-CCL14	A0A0B4J2E2	113 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	TMEM120B	A0PK00	339 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	SRP72	O76094	671 aa	Known RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	HSPA1A	P0DMV8	641 aa	Known RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	HSPA1B	P0DMV9	641 aa	Known RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	SREBF1	P36956	1147 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	NAMPT	P43490	491 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	ALDH18A1	P54886	795 aa	Known RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	CACNB2	Q08289	660 aa	Predicted RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	CCL15	Q16663	113 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	ELMO2	Q96JJ3	720 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	RASSF10	A6NK89	507 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	GOLGA8R	I6L899	631 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	CLASP2	O75122	1294 aa	Known RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	HARS2	P49590	506 aa	Known RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	DCAF6	Q58WW2	860 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	CHSY1	Q86X52	802 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	E2F7	Q96AV8	911 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	ARL8A	Q96BM9	186 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	RMDN2	Q96LZ7	410 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	PRPF18	Q99633	342 aa	Known RBP	11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	PCMTD2	Q9NV79	361 aa		11.43	□□□□□ -0.58
ARID1A-204	ENST00000430799	RGL2	O15211	777 aa		11.42	□□□□□ -0.58
ARID1A-204	ENST00000430799	PDK2	Q15119	407 aa		11.42	□□□□□ -0.58
ARID1A-204	ENST00000430799	COL23A1	Q86Y22	540 aa	Predicted RBP	11.42	□□□□□ -0.58
ARID1A-204	ENST00000430799	GMCL1	Q96IK5	515 aa		11.42	□□□□□ -0.58
ARID1A-204	ENST00000430799	AGBL1	Q96MI9	1066 aa		11.42	□□□□□ -0.58
ARID1A-204	ENST00000430799	GLT1D1	Q96MS3	346 aa		11.42	□□□□□ -0.58
ARID1A-204	ENST00000430799	KBTBD4	Q9NVX7	518 aa		11.42	□□□□□ -0.58
ARID1A-204	ENST00000430799	AURKC	Q9UQB9	309 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms