RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 PPP1R42Q7Z4L9 355 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 KCTD20Q7Z5Y7 419 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ERI1Q8IV48 349 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 DTX3LQ8TDB6 740 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 EPS8L3Q8TE67 593 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 GTF3C2Q8WUA4 911 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 PGM2Q96G03 612 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 OTUD5Q96G74 571 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ZNF274Q96GC6 653 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 RBM14Q96PK6 669 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 VPS35Q96QK1 796 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ABCG4Q9H172 646 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 SH2D4AQ9H788 454 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ARMC1Q9NVT9 282 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 TACC3Q9Y6A5 838 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 KDM3AQ9Y4C1 1321 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 MYOCOSA0A1B0GUC4 107 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 TTC26A0AVF1 554 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L15C9J2P7 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L10C9JJH3 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L13C9JLJ4 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L12C9JPN9 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L11C9JVI0 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L21D6R901 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L18D6R9N7 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L22D6RA61 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L17D6RBQ6 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L19D6RCP7 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L20D6RJB6 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ERVH48-1M5A8F1 160 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 CPLX1O14810 134 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 XPO1O14980 1071 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 IDH3BO43837 385 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 KPNA6O60684 536 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 DKC1O60832 514 aaKnown RBP eCLIP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 PLEKHA8P1O95397 391 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 GH1P01241 217 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 C6orf222P0C671 652 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 RBP3P10745 1247 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 CREB1P16220 341 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ZNF12P17014 697 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ZNF16P17020 682 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 RPL5P46777 297 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 TNNI2P48788 182 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 HK2P52789 917 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 POLGP54098 1239 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 YARSP54577 528 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 PTK2Q05397 1052 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 USP17L24Q0WX57 530 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 TRAPPC3LQ5T215 181 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 KLHDC7AQ5VTJ3 777 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 HGSNATQ68CP4 663 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 VSTM1Q6UX27 236 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 LYPD8Q6UX82 237 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 TMTC3Q6ZXV5 915 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 BEND5Q7L4P6 421 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 NET1Q7Z628 596 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 NOSTRINQ8IVI9 506 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ADSSL1Q8N142 457 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 CHCHD4Q8N4Q1 142 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 PDZD8Q8NEN9 1154 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 OR10Z1Q8NGY1 313 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 SHKBP1Q8TBC3 707 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 FAM174AQ8TBP5 190 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 NSRP1Q9H0G5 558 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 CCSER2Q9H7U1 834 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 SCUBE2Q9NQ36 999 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ARHGEF4Q9NR80 690 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 TXLNGQ9NUQ3 528 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 C9orf78Q9NZ63 289 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 DPP7Q9UHL4 492 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 VANGL2Q9ULK5 521 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 POLHQ9Y253 713 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 MYH3P11055 1940 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ARPC4-TTLL3A0A0A6YYG9 625 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 C2orf81A6NN90 581 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 B8ZZF3 427 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 H7C0C1 242 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ZC3H11AO75152 810 aaKnown RBP eCLIP4.6□□□□□ -1.672e-6■■■■■ 37.4
R3HDM1-206ENST00000429703 USP1O94782 785 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 SUN1O94901 812 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 EIF2S1P05198 315 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 HADHAP40939 763 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 SLC1A1P43005 524 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 PAFAH1B1P43034 410 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 PTPN9P43378 593 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 IFNAR2P48551 515 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 HARS2P49590 506 aaKnown RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 IST1P53990 364 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 MYBPC1Q00872 1141 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 GALK2Q01415 458 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 GK3PQ14409 553 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 TWISTNBQ3B726 338 aaPredicted RBP4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 ESCO1Q5FWF5 840 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 METTL11BQ5VVY1 283 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 FAM205BPQ63HN1 556 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 PDXDC1Q6P996 788 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 OTOP3Q7RTS5 596 aa4.6□□□□□ -1.67
R3HDM1-206ENST00000429703 NME9Q86XW9 330 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms