RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 FGFR4P22455 802 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 SPARCL1Q14515 664 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 RASA2Q15283 850 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 RGS21Q2M5E4 152 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 CDONQ4KMG0 1287 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 NXNQ6DKJ4 435 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 CCDC62Q6P9F0 684 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 FBXL19Q6PCT2 694 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 TPTE2Q6XPS3 522 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLC51BQ86UW2 128 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 SYCE1Q8N0S2 351 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 DCLK2Q8N568 766 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 VPS37AQ8NEZ2 397 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 TOR1AIP2Q8NFQ8 470 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 LILRB1Q8NHL6 650 aaPredicted RBP9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 EXD1Q8NHP7 514 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 SDCCAG3Q96C92 435 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 TTC25Q96NG3 672 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 HAUS8Q9BT25 410 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 OSBPL8Q9BZF1 889 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 PAIP1Q9H074 479 aaKnown RBP9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 MMRN2Q9H8L6 949 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 ARMC1Q9NVT9 282 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 THAP1Q9NVV9 213 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 SNX24Q9Y343 169 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 POTECB2RU33 542 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 GOLGA8MH3BSY2 632 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZBTB43O43298 467 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 SIN3BO75182 1162 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 FKBP9O95302 570 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZBTB11O95625 1053 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZNF23P17027 643 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 PRDX6P30041 224 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 RCVRNP35243 200 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 FDFT1P37268 417 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 BASP1P80723 227 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 SNAPC2Q13487 334 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 NANOGP8Q6NSW7 305 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 TUBA3EQ6PEY2 450 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 FRA10AC1Q70Z53 315 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 EPM2AIP1Q7L775 607 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 NLRX1Q86UT6 975 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 VGLL2Q8N8G2 317 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 OSCP1Q8WVF1 389 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 P2RX5Q93086 422 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 OSBP2Q969R2 916 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 TDRD1Q9BXT4 1180 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 MOV10Q9HCE1 1003 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 CCDC177Q9NQR7 707 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 BTG4Q9NY30 223 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 SEPT10Q9P0V9 454 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 RAB26Q9ULW5 256 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 RBMX2Q9Y388 322 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 PCDHGA11Q9Y5H2 935 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 COL14A1Q05707 1796 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 FAM25EA8MYX2 175 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLC22A1O15245 554 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 KRT6AP02538 564 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 KRT6BP04259 564 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 FYNP06241 537 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 IFIT1P09914 478 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 EEF2P13639 858 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 PON1P27169 355 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 KPNA1P52294 538 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 STAT2P52630 851 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 NCKAP1LP55160 1127 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 EVA1CP58658 441 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 AGAP9Q5VTM2 703 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 LMBRD2Q68DH5 695 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLC30A10Q6XR72 485 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 PEX26Q7Z412 305 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 HEATR4Q86WZ0 1026 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 DENND1AQ8TEH3 1009 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 RANBP9Q96S59 729 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 CYTH2Q99418 400 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 SHCBP1LQ9BZQ2 653 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLCO1B3Q9NPD5 702 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 VPS45Q9NRW7 570 aa9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 FAM217BQ9NTX9 383 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPA-206ENST00000429440 SYCE1LA8MT33 242 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 PRPF4O43172 522 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 CDH16O75309 829 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 UFL1O94874 794 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 FGGP02679 453 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 INHBBP09529 407 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 RBP3P10745 1247 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 RPL17P18621 184 aaKnown RBP9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 PMLP29590 882 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLC1A1P43005 524 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 ALDH3B2P48448 385 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 NPEPPSP55786 919 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 STK4Q13043 487 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 NR1H3Q13133 447 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 PDE1CQ14123 709 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 TLR1Q15399 786 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 MAPK6Q16659 721 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 MAN2A1Q16706 1144 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 DNAL1Q4LDG9 190 aa9.3□□□□□ -0.92
CDC42BPA-206ENST00000429440 TIGD2Q4W5G0 525 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms