RNA–Protein interactions for RNA: ENST00000429136.5

ATP13A3-202, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-202ENST00000429136 AFG3L2Q9Y4W6 797 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 ANKRD31Q8N7Z5 1873 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 TRAPPC3O43617 180 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 ASS1P00966 412 aaKnown RBP5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 TROVE2P10155 538 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 EIF4BP23588 611 aaKnown RBP5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 FLT3P36888 993 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 PTGIRP43119 386 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 MSH2P43246 934 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 BASP1P80723 227 aaKnown RBP5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 ZBTB16Q05516 673 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 SF3A3Q12874 501 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 SNAPC2Q13487 334 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 MAMLD1Q13495 774 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 TMEM132DQ14C87 1099 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 ZKSCAN8Q15776 578 aaPredicted RBP5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 LY6KQ17RY6 165 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 CCDC38Q502W7 563 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 FAM102AQ5T9C2 384 aaPredicted RBP5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 SLC39A4Q6P5W5 647 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 PLPPR4Q7Z2D5 763 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 HOMEZQ8IX15 550 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 GIMAP7Q8NHV1 300 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 EPS8L3Q8TE67 593 aaKnown RBP5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 SEC14L1Q92503 715 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 HSPH1Q92598 858 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 GRAMD1AQ96CP6 724 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 WNK4Q96J92 1243 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 C9orf72Q96LT7 481 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 ACAP3Q96P50 834 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 ASCC2Q9H1I8 757 aaPredicted RBP5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 EFCC1Q9HA90 598 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 CYP3A43Q9HB55 503 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 CHST7Q9NS84 486 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 FZD1Q9UP38 647 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 NEU2Q9Y3R4 380 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 NUB1Q9Y5A7 615 aa5.7□□□□□ -1.5
ATP13A3-202ENST00000429136 ZC3H4Q9UPT8 1303 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 A6NJR5 290 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 CYP1A1P04798 512 aaPredicted RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 INHBAP08476 426 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 UNGP13051 313 aaPredicted RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 ATICP31939 592 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 SARNPP82979 210 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 PDIA2Q13087 525 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 ZRSR2Q15696 482 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 BBS9Q3SYG4 887 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 TFDP3Q5H9I0 405 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 SPOCD1Q6ZMY3 1216 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 CATSPER4Q7RTX7 472 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 BEST2Q8NFU1 509 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 OR5B17Q8NGF7 314 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.69□□□□□ -1.59e-7■□□□□ 11
ATP13A3-202ENST00000429136 PPP1R14CQ8TAE6 165 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 MDM1Q8TC05 714 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 SGSM3Q96HU1 749 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 PPP1R16BQ96T49 567 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 TMEM109Q9BVC6 243 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 PCSK1NQ9UHG2 260 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 AGAP1Q9UPQ3 857 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 ADGRA3Q8IWK6 1321 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 ZNF541Q9H0D2 1346 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 TMEM120BA0PK00 339 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 PGK2P07205 417 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 PAEPP09466 180 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 MCF2P10911 925 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 CA4P22748 312 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 CLCN3P51790 818 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 YWHAGP61981 247 aaKnown RBP eCLIP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 CDC42EP1Q00587 391 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 PLCB4Q15147 1175 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 HIF1AQ16665 826 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 CELF3Q5SZQ8 465 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 PLEKHA7Q6IQ23 1121 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 MON1BQ7L1V2 547 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 PNMA8AQ86V59 439 aaPredicted RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 FBXO16Q8IX29 292 aaPredicted RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 CTAGE3PQ8IX95 158 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 HACE1Q8IYU2 909 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 REPS2Q8NFH8 660 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 GDAP1Q8TB36 358 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 PIK3R5Q8WYR1 880 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 KIF12Q96FN5 646 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 ACO2Q99798 780 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 PRMT1Q99873 361 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 NGRNQ9NPE2 291 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 KIAA1257Q9ULG3 409 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 SMG5Q9UPR3 1016 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 STYXL1Q9Y6J8 313 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 CDK5RAP2Q96SN8 1893 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 ZBED1O96006 694 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 CALCAP01258 141 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 VDRP11473 427 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 MMP8P22894 467 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 SDC4P31431 198 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 EIF3EP60228 445 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 MORF4L2Q15014 288 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 SNCBQ16143 134 aa5.69□□□□□ -1.5
ATP13A3-202ENST00000429136 CYP4A22Q5TCH4 519 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms