RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 S100A5P33763 92 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 CNTN1Q12860 1018 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 USP10Q14694 798 aaKnown RBP9.35□□□□□ -0.91
CTNND1-208ENST00000428599 CCL15Q16663 113 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 DGKDQ16760 1214 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 ZRANB3Q5FWF4 1079 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 UGT3A1Q6NUS8 523 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 VMP1Q96GC9 406 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 CINPQ9BW66 212 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-208ENST00000428599 APOL5Q9BWW9 433 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 TMEM245Q9H330 911 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 MRGBPQ9NV56 204 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 DCDC2CA8MYV0 355 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 RUNX1T1Q06455 604 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 ZNF211Q13398 564 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-208ENST00000428599 SGSM1Q2NKQ1 1148 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 TRIM65Q6PJ69 517 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 CCDC137Q6PK04 289 aaKnown RBP9.35□□□□□ -0.91
CTNND1-208ENST00000428599 ADCK1Q86TW2 530 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 CHSY1Q86X52 802 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 PLD3Q8IV08 490 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 GPRC5AQ8NFJ5 357 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 GLT1D1Q96MS3 346 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 TSC22D3Q99576 134 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 RIC8BQ9NVN3 520 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 RPS6KB2Q9UBS0 482 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 SLC39A10Q9ULF5 831 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 VPS9D1Q9Y2B5 631 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 DEPDC5O75140 1603 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 COL5A2P05997 1499 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-208ENST00000428599 ANO9A1A5B4 782 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 DEAF1O75398 565 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-208ENST00000428599 WBP4O75554 376 aaKnown RBP9.35□□□□□ -0.91
CTNND1-208ENST00000428599 SRP72O76094 671 aaKnown RBP9.35□□□□□ -0.91
CTNND1-208ENST00000428599 EYA4O95677 639 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 EGFRP00533 1210 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 PDHBP11177 359 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 ATP1A3P13637 1013 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 ARL8AQ96BM9 186 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 AGAP3Q96P47 875 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 C17orf80Q9BSJ5 609 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 DDX28Q9NUL7 540 aaKnown RBP9.35□□□□□ -0.91
CTNND1-208ENST00000428599 GID8Q9NWU2 228 aa9.35□□□□□ -0.91
CTNND1-208ENST00000428599 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.35□□□□□ -0.912e-7■■□□□ 14.4
CTNND1-208ENST00000428599 RRN3P2A6NIE6 340 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 PRR29P0C7W0 189 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 ERVK-10P10266 1014 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 ACADMP11310 421 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 PDGFRAP16234 1089 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 PRCPP42785 496 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 PCSK7Q16549 785 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 SYDE1Q6ZW31 735 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 ATP6V0D2Q8N8Y2 350 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 TMEM169Q96HH4 297 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 ABCB6Q9NP58 842 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 DPP7Q9UHL4 492 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 RTN2O75298 545 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 BRD2P25440 801 aaKnown RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 SERPINB9P50453 376 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 NPEPPSP55786 919 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 TGFB2P61812 414 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 ATP2C1P98194 919 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 PTK6Q13882 451 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 POLD3Q15054 466 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 CCDC142Q17RM4 750 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 C9orf131Q5VYM1 1079 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 ANKRD13AQ8IZ07 590 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 RIN2Q8WYP3 895 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 DPF3Q92784 378 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 MRPL1Q9BYD6 325 aaKnown RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 ABHD10Q9NUJ1 306 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 SPASTQ9UBP0 616 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 ZNF229Q9UJW7 825 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 PRG3Q9Y2Y8 225 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 TTLL13PA6NNM8 815 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 HOXA2O43364 376 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 CYTH3O43739 400 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 FYNP06241 537 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 SSTR3P32745 418 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 SLC11A2P49281 568 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 RGS7P49802 495 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 TTLL9Q3SXZ7 439 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 FRMD5Q7Z6J6 570 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 VPS50Q96JG6 964 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 OLFM3Q96PB7 478 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 AGPAT1Q99943 283 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 HPS4Q9NQG7 708 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 RRAGDQ9NQL2 400 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 BLOC1S6Q9UL45 172 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 PXDNQ92626 1479 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 SLC16A3O15427 465 aaKnown RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 PDGFRBP09619 1106 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 CYP2C9P11712 490 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 TBL3Q12788 808 aaKnown RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 DHX34Q14147 1143 aaKnown RBP9.34□□□□□ -0.91
CTNND1-208ENST00000428599 HIC1Q14526 733 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 CLEC4FQ8N1N0 589 aa9.34□□□□□ -0.91
CTNND1-208ENST00000428599 SLC25A41Q8N5S1 370 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms