RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 LILRA4P59901 499 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 DEFB103AP81534 67 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 RNASELQ05823 741 aaKnown RBP12.87□□□□□ -0.35
RFC4-206ENST00000427785 DSC1Q08554 894 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 IKBKEQ14164 716 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 UPP1Q16831 310 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 ARHGAP29Q52LW3 1261 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 CCDC122Q5T0U0 273 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 MFSD5Q6N075 450 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 ALKBH5Q6P6C2 394 aaKnown RBP12.87□□□□□ -0.35
RFC4-206ENST00000427785 TMCO2Q7Z6W1 182 aaPredicted RBP12.87□□□□□ -0.35
RFC4-206ENST00000427785 OSTM1Q86WC4 334 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 TMEM199Q8N511 208 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 SLC4A11Q8NBS3 891 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 KBTBD7Q8WVZ9 684 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 TFAP2BQ92481 460 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 FAXDC2Q96IV6 333 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 CASD1Q96PB1 797 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 ZSWIM1Q9BR11 485 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 LACRTQ9GZZ8 138 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 GDAP2Q9NXN4 497 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 DNAJB4Q9UDY4 337 aa12.87□□□□□ -0.35
RFC4-206ENST00000427785 BARX2Q9UMQ3 279 aaPredicted RBP12.87□□□□□ -0.35
RFC4-206ENST00000427785 PRG3Q9Y2Y8 225 aaPredicted RBP12.87□□□□□ -0.35
RFC4-206ENST00000427785 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.87□□□□□ -0.35
RFC4-206ENST00000427785 CYB561D2O14569 222 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 HOXA2O43364 376 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 HUS1O60921 280 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 ITGB1P05556 798 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 RPL9P32969 192 aaKnown RBP12.86□□□□□ -0.35
RFC4-206ENST00000427785 MAGEA1P43355 309 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 OR1G1P47890 313 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 WSCD1Q658N2 575 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 FAM117BQ6P1L5 589 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 DSTYKQ6XUX3 929 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 COLGALT2Q8IYK4 626 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 CRIPAKQ8N1N5 446 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 APPL2Q8NEU8 664 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 OR6B3Q8NGW1 331 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 SENP8Q96LD8 212 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 UROC1Q96N76 676 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 FAM193BQ96PV7 902 aaPredicted RBP12.86□□□□□ -0.35
RFC4-206ENST00000427785 PDCL3Q9H2J4 239 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 DPEP3Q9H4B8 488 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 PRKAG2Q9UGJ0 569 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 GUCA1BQ9UMX6 200 aa12.86□□□□□ -0.35
RFC4-206ENST00000427785 PLXNA4Q9HCM2 1894 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 ABHD14A-ACY1A0A1B0GW23 586 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 MACROD2A1Z1Q3 448 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 GOLGA6L9A6NEM1 432 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 B3GAT3O94766 335 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 PAEPP09466 180 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 SYN1P17600 705 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 ABCB4P21439 1286 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.35
RFC4-206ENST00000427785 WDR5P61964 334 aaKnown RBP12.85□□□□□ -0.35
RFC4-206ENST00000427785 CCDC142Q17RM4 750 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 CLEC16AQ2KHT3 1053 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 TIGD5Q53EQ6 642 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 NAA35Q5VZE5 725 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 CD300LGQ6UXG3 332 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 NYAP1Q6ZVC0 841 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 DPH6Q7L8W6 267 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 ACOT1Q86TX2 421 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 ZNF677Q86XU0 584 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 LRRC43Q8N309 656 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 TOP6BLQ8N6T0 577 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 BADQ92934 168 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 DDX27Q96GQ7 796 aaKnown RBP12.85□□□□□ -0.35
RFC4-206ENST00000427785 TMEM176AQ96HP8 235 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 LPIN3Q9BQK8 851 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 NT5C1AQ9BXI3 368 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 SNX25Q9H3E2 840 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 NRDE2Q9H7Z3 1164 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 IL23AQ9NPF7 189 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 LUC7LQ9NQ29 371 aaKnown RBP12.85□□□□□ -0.35
RFC4-206ENST00000427785 FAM49BQ9NUQ9 324 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 KANSL3Q9P2N6 904 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 ZMYND8Q9ULU4 1186 aaPredicted RBP12.85□□□□□ -0.35
RFC4-206ENST00000427785 TIMM13Q9Y5L4 95 aaPredicted RBP12.85□□□□□ -0.35
RFC4-206ENST00000427785 NCANO14594 1321 aa12.85□□□□□ -0.35
RFC4-206ENST00000427785 A8MXQ7 604 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
RFC4-206ENST00000427785 TACC1O75410 805 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 AMHP03971 560 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 PFKMP08237 780 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 ODC1P11926 461 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 WARSP23381 471 aaKnown RBP12.84□□□□□ -0.35
RFC4-206ENST00000427785 ACAT1P24752 427 aaKnown RBP12.84□□□□□ -0.35
RFC4-206ENST00000427785 PBX3P40426 434 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 SLC11A1P49279 550 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 GALCP54803 685 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 BCAR1P56945 870 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 PSMC1P62191 440 aaKnown RBP12.84□□□□□ -0.35
RFC4-206ENST00000427785 NOMO3P69849 1222 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 FPGSQ05932 587 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 KIF5AQ12840 1032 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 PPIGQ13427 754 aaKnown RBP eCLIP12.84□□□□□ -0.353e-7■■□□□ 11.7
RFC4-206ENST00000427785 GOLGA7BQ2TAP0 167 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms