RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 KMT2EQ8IZD2 1858 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 CLIC2O15247 247 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 HUS1O60921 280 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 MICAL2O94851 1124 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 TNNC2P02585 160 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 PFKFB1P16118 471 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 AOC1P19801 751 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 CMA1P23946 247 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 CCR2P41597 374 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 CDR1P51861 262 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 RBP5P82980 135 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 EHHADHQ08426 723 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 TCF15Q12870 199 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 LRRC52Q8N7C0 313 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 FAM200AQ8TCP9 573 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 SCFD1Q8WVM8 642 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 PAGE5Q96GU1 130 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 FAM84AQ96KN4 292 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 SEPT5Q99719 369 aaPredicted RBP19.85■□□□□ 0.77
GPC1-205ENST00000427506 RTP3Q9BQQ7 232 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 ZCWPW1Q9H0M4 648 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 ARHGEF3Q9NR81 526 aa19.85■□□□□ 0.77
GPC1-205ENST00000427506 TGFB1I1O43294 461 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 GALR2O43603 387 aaPredicted RBP19.84■□□□□ 0.77
GPC1-205ENST00000427506 PI15O43692 258 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 ACTN4O43707 911 aaKnown RBP19.84■□□□□ 0.77
GPC1-205ENST00000427506 SOAT2O75908 522 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 GJA1P17302 382 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 TUFMP49411 452 aaKnown RBP19.84■□□□□ 0.77
GPC1-205ENST00000427506 CYP2J2P51589 502 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 BECN1Q14457 450 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 DUOXA2Q1HG44 320 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 MGAT5BQ3V5L5 792 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 DCP1BQ8IZD4 617 aaKnown RBP19.84■□□□□ 0.77
GPC1-205ENST00000427506 TTC9BQ8N6N2 239 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 IRF2BPLQ9H1B7 796 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 TBC1D17Q9HA65 648 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 EXOC1Q9NV70 894 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 INTS13Q9NVM9 706 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 USP25Q9UHP3 1055 aa19.84■□□□□ 0.77
GPC1-205ENST00000427506 ECI2O75521 394 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 EPHA5P54756 1037 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 SNRPFP62306 86 aaKnown RBP19.83■□□□□ 0.77
GPC1-205ENST00000427506 SMARCB1Q12824 385 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 MYO1EQ12965 1108 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 SNRNP35Q16560 246 aaKnown RBP19.83■□□□□ 0.77
GPC1-205ENST00000427506 TANGO2Q6ICL3 276 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 ITIH5Q86UX2 942 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 ALYREFQ86V81 257 aaKnown RBP19.83■□□□□ 0.77
GPC1-205ENST00000427506 XXYLT1Q8NBI6 393 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 OR5B17Q8NGF7 314 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 FNBP1Q96RU3 617 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 SCAND2PQ9GZW5 306 aaPredicted RBP19.83■□□□□ 0.77
GPC1-205ENST00000427506 DNAJC25Q9H1X3 360 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 SLITRK6Q9H5Y7 841 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 ZFP14Q9HCL3 533 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 HSFX1Q9UBD0 423 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 ASB3Q9Y575 518 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 SNX9Q9Y5X1 595 aa19.83■□□□□ 0.77
GPC1-205ENST00000427506 NOTCH4Q99466 2003 aa19.83■□□□□ 0.76
GPC1-205ENST00000427506 SCN1AP35498 2009 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 H0Y858 1186 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 DLATP10515 647 aaKnown RBP19.82■□□□□ 0.76
GPC1-205ENST00000427506 TNNI1P19237 187 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 HOXD11P31277 338 aaPredicted RBP19.82■□□□□ 0.76
GPC1-205ENST00000427506 SYKP43405 635 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 TSPY1Q01534 308 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 PFKPQ01813 784 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 SNW1Q13573 536 aaKnown RBP19.82■□□□□ 0.76
GPC1-205ENST00000427506 VEPH1Q14D04 833 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 TEAD2Q15562 447 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 TAF12Q16514 161 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 KNOP1Q1ED39 458 aaKnown RBP19.82■□□□□ 0.76
GPC1-205ENST00000427506 FAM78AQ5JUQ0 283 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 POTEHQ6S545 545 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 DNAJB7Q7Z6W7 309 aaPredicted RBP19.82■□□□□ 0.76
GPC1-205ENST00000427506 LRRTM3Q86VH5 581 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 WDR49Q8IV35 697 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 TMEM86AQ8N2M4 240 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 PDCL2Q8N4E4 241 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 SPPL2BQ8TCT7 592 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 C2orf15Q8WU43 125 aaKnown RBP19.82■□□□□ 0.76
GPC1-205ENST00000427506 ATOH1Q92858 354 aaPredicted RBP19.82■□□□□ 0.76
GPC1-205ENST00000427506 ELSPBP1Q96BH3 223 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 SHDQ96IW2 340 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 PLA2G2FQ9BZM2 168 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 ABI2Q9NYB9 513 aaPredicted RBP19.82■□□□□ 0.76
GPC1-205ENST00000427506 CGNQ9P2M7 1197 aaKnown RBP19.82■□□□□ 0.76
GPC1-205ENST00000427506 SIX4Q9UIU6 781 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 L1RE1Q9UN81 338 aa19.82■□□□□ 0.76
GPC1-205ENST00000427506 TSC2P49815 1807 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 PTPRJQ12913 1337 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 A0A1W2PRU2 124 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 NRG2O14511 850 aaPredicted RBP19.81■□□□□ 0.76
GPC1-205ENST00000427506 MOSPD3O75425 235 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 MYL7Q01449 175 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 PSMD2Q13200 908 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 BMT2Q1RMZ1 405 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 KMT5BQ4FZB7 885 aa19.81■□□□□ 0.76
GPC1-205ENST00000427506 SCARA3Q6AZY7 606 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms