RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 C8AP07357 584 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 ATF2P15336 505 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 PIK3CAP42336 1068 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 TNNC1P63316 161 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 ZNF699Q32M78 642 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 DPCR1Q3MIW9 517 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 CCDC183Q5T5S1 534 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 TMC5Q6UXY8 1006 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 RTL10Q7L3V2 364 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 LIMS2Q7Z4I7 341 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 OR10T2Q8NGX3 314 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 RTP3Q9BQQ7 232 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 AFF4Q9UHB7 1163 aaKnown RBP26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 MAFFQ9ULX9 164 aa26.99■■□□□ 1.91
HERPUD2-205ENST00000427455 RFPL2O75678 378 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 PAPLNO95428 1278 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 SOWAHAQ2M3V2 549 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 UVSSAQ2YD98 709 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 WDR72Q3MJ13 1102 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 DCAF17Q5H9S7 520 aaPredicted RBP26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 TCERG1LQ5VWI1 586 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 CYP26C1Q6V0L0 522 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 CCDC149Q6ZUS6 474 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 FRMD5Q7Z6J6 570 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 GPR149Q86SP6 731 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 SLC7A14Q8TBB6 771 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 RIPOR3Q96MK2 946 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 NECTIN4Q96NY8 510 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 RHOBTB2Q9BYZ6 727 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 MMRN2Q9H8L6 949 aa26.98■■□□□ 1.91
HERPUD2-205ENST00000427455 CCDC195A0A1B0GUA6 201 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 CLSTN1O94985 981 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 FGFR1OPO95684 399 aaKnown RBP26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 HNRNPA1P09651 372 aaKnown RBP eCLIP26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 OR4Q2P0C623 313 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 HOXA9P31269 272 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 ELF1P32519 619 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 MTHFRP42898 656 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 MXI1P50539 228 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 MYL7Q01449 175 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 GPR17Q13304 367 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 CBX2Q14781 532 aaPredicted RBP26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 CCDC40Q4G0X9 1142 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 PPM1LQ5SGD2 360 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 KRT39Q6A163 491 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 TAF4BQ92750 862 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 MMS19Q96T76 1030 aa26.97■■□□□ 1.91
HERPUD2-205ENST00000427455 GNA14O95837 355 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 HLA-DRAP01903 254 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 LHX1P48742 406 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 ADCY1Q08828 1119 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 SGSM1Q2NKQ1 1148 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 RNF19BQ6ZMZ0 732 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 TCEAL8Q8IYN2 117 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 ADAMTS19Q8TE59 1207 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 TMEM209Q96SK2 561 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 IMPG2Q9BZV3 1241 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 ZCWPW1Q9H0M4 648 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 DDX43Q9NXZ2 648 aaKnown RBP26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 PRKAG3Q9UGI9 489 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 CDH22Q9UJ99 828 aa26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 TCF20Q9UGU0 1960 aaKnown RBP26.96■■□□□ 1.91
HERPUD2-205ENST00000427455 C2orf16Q68DN1 1984 aa26.95■■□□□ 1.91
HERPUD2-205ENST00000427455 PRRG1O14668 218 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 GABRDO14764 452 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 ASS1P00966 412 aaKnown RBP26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 TSPY1Q01534 308 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 ZNF667Q5HYK9 610 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 ATAT1Q5SQI0 421 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 OSTM1Q86WC4 334 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 TAS1R2Q8TE23 839 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 KBTBD7Q8WVZ9 684 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 SLC35C1Q96A29 364 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 ZNF707Q96C28 371 aaPredicted RBP26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 MED15Q96RN5 788 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 ACBD6Q9BR61 282 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 SRRTQ9BXP5 876 aaKnown RBP26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 PRKD2Q9BZL6 878 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 CYP4F11Q9HBI6 524 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 NXF1Q9UBU9 619 aaKnown RBP26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 C5orf42Q9H799 3197 aa26.95■■□□□ 1.9
HERPUD2-205ENST00000427455 TACC1O75410 805 aa26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 POU2F2P09086 479 aa26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 WEE2P0C1S8 567 aa26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 P4HA1P13674 534 aa26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 PTMSP20962 102 aa26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 WARSP23381 471 aaKnown RBP26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 ERCC5P28715 1186 aaPredicted RBP26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 PCSK1P29120 753 aa26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 CT47A1Q5JQC4 288 aaPredicted RBP26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 SMG7Q92540 1137 aaKnown RBP26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 PGLYRP2Q96PD5 576 aa26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 TTC28Q96AY4 2481 aa26.94■■□□□ 1.9
HERPUD2-205ENST00000427455 DENND4AQ7Z401 1863 aa26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 MTMR11A4FU01 709 aa26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 SEC24AO95486 1093 aa26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 FAM163BP0C2L3 166 aa26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 MARSP56192 900 aaKnown RBP26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 SMARCB1Q12824 385 aa26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 SLC39A12Q504Y0 691 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms