RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SOX10P56693 466 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 CCDC30Q5VVM6 783 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 Q6YL49 198 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 FKBP9P1Q75LS8 142 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 G2E3Q7L622 706 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 PRIMA1Q86XR5 153 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 ARHGEF19Q8IW93 802 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 DHX37Q8IY37 1157 aaKnown RBP6.81□□□□□ -1.32
C9orf3-205ENST00000427193 TTC5Q8N0Z6 440 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 BEND2Q8NDZ0 799 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 FEZ1Q99689 392 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 CHMP4AQ9BY43 222 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 ANO3Q9BYT9 981 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 SERHL2Q9H4I8 314 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 TAF1DQ9H5J8 278 aaPredicted RBP6.81□□□□□ -1.32
C9orf3-205ENST00000427193 RIOX1Q9H6W3 641 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 DBF4Q9UBU7 674 aaPredicted RBP6.81□□□□□ -1.32
C9orf3-205ENST00000427193 ZNHIT2Q9UHR6 403 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 TJP1Q07157 1748 aa6.81□□□□□ -1.32
C9orf3-205ENST00000427193 ABCC4O15439 1325 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 LEFTY2O00292 366 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 POLRMTO00411 1230 aaKnown RBP6.8□□□□□ -1.32
C9orf3-205ENST00000427193 LPXNO60711 386 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 PRAMEF4O60810 478 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 CDC45O75419 566 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 NCR1O76036 304 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 TRIM27P14373 513 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 ZSCAN20P17040 1043 aaPredicted RBP6.8□□□□□ -1.32
C9orf3-205ENST00000427193 RFC4P35249 363 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 BMPR1AP36894 532 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 USP14P54578 494 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 EIF5P55010 431 aaKnown RBP6.8□□□□□ -1.32
C9orf3-205ENST00000427193 BEAN1Q3B7T3 259 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 ATF7IPQ6VMQ6 1270 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 SNX33Q8WV41 574 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 VOPP1Q96AW1 172 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 MFSD3Q96ES6 412 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 PAWRQ96IZ0 340 aaKnown RBP6.8□□□□□ -1.32
C9orf3-205ENST00000427193 CAPNS2Q96L46 248 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 EMC7Q9NPA0 242 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 CHPF2Q9P2E5 772 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 ABT1Q9ULW3 272 aaKnown RBP6.8□□□□□ -1.32
C9orf3-205ENST00000427193 CASP8AP2Q9UKL3 1982 aa6.8□□□□□ -1.32
C9orf3-205ENST00000427193 MKI67P46013 3256 aaKnown RBP6.8□□□□□ -1.32
C9orf3-205ENST00000427193 PTPRCP08575 1304 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 KIF16BQ96L93 1317 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 ZAR1LA6NP61 321 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 TMEM127O75204 238 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 GASTP01350 101 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 A1BGP04217 495 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 CLEC2LP0C7M8 214 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 NHLH2Q02577 135 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 TRIM25Q14258 630 aaKnown RBP6.79□□□□□ -1.32
C9orf3-205ENST00000427193 C20orf194Q5TEA3 1177 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 BROXQ5VW32 411 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 CCDC62Q6P9F0 684 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 SUPT20HQ8NEM7 779 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 OR10H5Q8NGA6 315 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 SLC5A5Q92911 643 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 SMC4Q9NTJ3 1288 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 HYPKQ9NX55 129 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 DKK2Q9UBU2 259 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 NOB1Q9ULX3 412 aaKnown RBP6.79□□□□□ -1.32
C9orf3-205ENST00000427193 TNNQ9UQP3 1299 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 CDY2AQ9Y6F7 541 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 LAMB4A4D0S4 1761 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 DLEC1Q9Y238 1755 aa6.79□□□□□ -1.32
C9orf3-205ENST00000427193 COL5A3P25940 1745 aaPredicted RBP6.79□□□□□ -1.32
C9orf3-205ENST00000427193 MYH14Q7Z406 1995 aaKnown RBP6.78□□□□□ -1.32
C9orf3-205ENST00000427193 USP42Q9H9J4 1324 aaKnown RBP6.78□□□□□ -1.32
C9orf3-205ENST00000427193 TBKBP1A7MCY6 615 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 ITGA10O75578 1167 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 STARD3NLO95772 234 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 SPATA31D3P0C874 917 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 RBP3P10745 1247 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 TM4SF1P30408 202 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 MAP2K2P36507 400 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 IL6STP40189 918 aaPredicted RBP6.78□□□□□ -1.32
C9orf3-205ENST00000427193 AVPR1BP47901 424 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 RNASE9P60153 205 aaKnown RBP6.78□□□□□ -1.32
C9orf3-205ENST00000427193 EFCAB12Q6NXP0 572 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 OLFML1Q6UWY5 402 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 BTNL9Q6UXG8 535 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 SPATA31D4Q6ZUB0 917 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 PDZD4Q76G19 769 aaPredicted RBP6.78□□□□□ -1.32
C9orf3-205ENST00000427193 RASSF3Q86WH2 238 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 SYT12Q8IV01 421 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 CNTROBQ8N137 903 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 WDR11Q9BZH6 1224 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 ANKFY1Q9P2R3 1169 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 SRP68Q9UHB9 627 aaKnown RBP6.78□□□□□ -1.32
C9orf3-205ENST00000427193 ZBTB1Q9Y2K1 713 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 NOC2LQ9Y3T9 749 aaKnown RBP6.78□□□□□ -1.32
C9orf3-205ENST00000427193 CACNA1FO60840 1977 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 LTBP1Q14766 1721 aa6.78□□□□□ -1.32
C9orf3-205ENST00000427193 TCERG1O14776 1098 aaKnown RBP6.77□□□□□ -1.33
C9orf3-205ENST00000427193 PLIN1O60240 522 aa6.77□□□□□ -1.33
C9orf3-205ENST00000427193 NDUFA10O95299 355 aa6.77□□□□□ -1.33
C9orf3-205ENST00000427193 ANXA1P04083 346 aa6.77□□□□□ -1.33
C9orf3-205ENST00000427193 EIF2S2P20042 333 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms