RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SKOR2Q2VWA4 1001 aaPredicted RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 LMBRD2Q68DH5 695 aaPredicted RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 TREML4Q6UXN2 200 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 C1orf127Q8N9H9 656 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 C3orf58Q8NDZ4 430 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 BEST2Q8NFU1 509 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 CACTINQ8WUQ7 758 aaKnown RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 MYLIPQ8WY64 445 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 CCDC127Q96BQ5 260 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 TMEM169Q96HH4 297 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 TSG101Q99816 390 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 MKNK1Q9BUB5 465 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 SRRTQ9BXP5 876 aaKnown RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 LMAN2LQ9H0V9 348 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 DPP3Q9NY33 737 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 PUF60Q9UHX1 559 aaKnown RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 RWDD2AQ9UIY3 292 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 CTNND2Q9UQB3 1225 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 FRMD4BQ9Y2L6 1034 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 MTCH2Q9Y6C9 303 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 SCN1AP35498 2009 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 BICDL2A1A5D9 508 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 LRRIQ3A6PVS8 624 aaPredicted RBP8□□□□□ -1.13
LINC01049-201ENST00000426840 B3GAT3O94766 335 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 KIF4AO95239 1232 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 ERCC5P28715 1186 aaPredicted RBP8□□□□□ -1.13
LINC01049-201ENST00000426840 BRCC3P46736 316 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 VAMP7P51809 220 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 TFAMQ00059 246 aaKnown RBP8□□□□□ -1.13
LINC01049-201ENST00000426840 ENPEPQ07075 957 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 USP4Q13107 963 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 TIGD5Q53EQ6 642 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 CT47A1Q5JQC4 288 aaPredicted RBP8□□□□□ -1.13
LINC01049-201ENST00000426840 KIAA0319Q5VV43 1072 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 C9orf57Q5W0N0 161 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 FUT10Q6P4F1 479 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 SASS6Q6UVJ0 657 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 TRAPPC11Q7Z392 1133 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 IRF2BP1Q8IU81 584 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 WDR49Q8IV35 697 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 FAM186BQ8IYM0 893 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 VPS52Q8N1B4 723 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 HASPINQ8TF76 798 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 MRPL38Q96DV4 380 aaKnown RBP8□□□□□ -1.13
LINC01049-201ENST00000426840 CEP63Q96MT8 703 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 FNBP1Q96RU3 617 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 CGRRF1Q99675 332 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 FUCA2Q9BTY2 467 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 CHST7Q9NS84 486 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 SIX4Q9UIU6 781 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 ADAM28Q9UKQ2 775 aa8□□□□□ -1.13
LINC01049-201ENST00000426840 PRRC2BQ5JSZ5 2229 aaKnown RBP8□□□□□ -1.13
LINC01049-201ENST00000426840 I3L4J1 428 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 IKBKBO14920 756 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 SLC16A3O15427 465 aaKnown RBP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 LETM1O95202 739 aaPredicted RBP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 VNN1O95497 513 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 CXCL14O95715 111 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 TNNC2P02585 160 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 SOD2P04179 222 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 ITGB3P05106 788 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 DLATP10515 647 aaKnown RBP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 CTSAP10619 480 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 TNNI1P19237 187 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 FGFR3P22607 806 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 IGFBP4P22692 258 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 AARSP49588 968 aaKnown RBP eCLIP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 MARSP56192 900 aaKnown RBP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 LILRA4P59901 499 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 PTSQ03393 145 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 TYRO3Q06418 890 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 PPP3CAQ08209 521 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 BFSP1Q12934 665 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 MRPL58Q14197 206 aaKnown RBP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 PTPROQ16827 1216 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 PDE12Q6L8Q7 609 aaKnown RBP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 C15orf39Q6ZRI6 1047 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 C11orf57Q6ZUT1 292 aaPredicted RBP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 INTS8Q75QN2 995 aaKnown RBP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 SV2AQ7L0J3 742 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 PRICKLE2Q7Z3G6 844 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 TMC7Q7Z402 723 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 FRMD5Q7Z6J6 570 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 DEPDC4Q8N2C3 294 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 CSGALNACT2Q8N6G5 542 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 MRPL43Q8N983 215 aaKnown RBP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 AUTS2Q8WXX7 1259 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 SYAP1Q96A49 352 aaPredicted RBP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 ANKRD36BP1Q96IX9 119 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 SUSD3Q96L08 255 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 GAS2L1Q99501 681 aaPredicted RBP7.99□□□□□ -1.13
LINC01049-201ENST00000426840 HERC2P3Q9BVR0 1158 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 MTMR12Q9C0I1 747 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 ZBP1Q9H171 429 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 TLR9Q9NR96 1032 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 ANO10Q9NW15 660 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 ITGA11Q9UKX5 1188 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 AGAP1Q9UPQ3 857 aa7.99□□□□□ -1.13
LINC01049-201ENST00000426840 PCDHGC5Q9Y5F6 944 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms