RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 C2CD2Q9Y426 696 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 NFE2L3Q9Y4A8 694 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 PCDHGC5Q9Y5F6 944 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 FNDC1Q4ZHG4 1894 aaPredicted RBP6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 ANO9A1A5B4 782 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 KCNJ18B7U540 433 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 LPXNO60711 386 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 FGF18O76093 207 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 C4BPAP04003 597 aaKnown RBP6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 ALDH2P05091 517 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 ITGB3P05106 788 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 TMEM191BP0C7N4 346 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 ATP1A3P13637 1013 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 KRT13P13646 458 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 ZNF18P17022 549 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 CYP3A5P20815 502 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 POLR2BP30876 1174 aaKnown RBP6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 ZNF165P49910 485 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 ZNF445P59923 1031 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 MYL6P60660 151 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 MYL5Q02045 173 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 APBA1Q02410 837 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 CAMK1Q14012 370 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 KCNJ12Q14500 433 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 HSP90AA2PQ14568 343 aaPredicted RBP6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 GRIN2CQ14957 1233 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 TPD52L1Q16890 204 aaPredicted RBP6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 DUOXA2Q1HG44 320 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 CBWD6Q4V339 395 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 DCAF17Q5H9S7 520 aaPredicted RBP6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 CBWD3Q5JTY5 395 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 MIIPQ5JXC2 388 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 CBWD5Q5RIA9 395 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 TCERG1LQ5VWI1 586 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 DCLRE1AQ6PJP8 1040 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 C15orf39Q6ZRI6 1047 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 INTS8Q75QN2 995 aaKnown RBP6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 GAS2L3Q86XJ1 694 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 CREBRFQ8IUR6 639 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 TRIM59Q8IWR1 403 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 BEST2Q8NFU1 509 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 SPPL3Q8TCT6 385 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 AUTS2Q8WXX7 1259 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 SEMA4DQ92854 862 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 FNBP1Q96RU3 617 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 BPIFA3Q9BQP9 254 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 OCSTAMPQ9BR26 566 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 GPR62Q9BZJ7 368 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 TSPY26PQ9H489 355 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 PRDM12Q9H4Q4 367 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 ZNF576Q9H609 170 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 APOBEC3GQ9HC16 384 aaKnown RBP6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 TMPRSS4Q9NRS4 437 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 SLC38A7Q9NVC3 462 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 TAB2Q9NYJ8 693 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 SPG21Q9NZD8 308 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 GPSM3Q9Y4H4 160 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 PCDHB12Q9Y5F1 795 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 TRIOBPQ9H2D6 2365 aa6.16□□□□□ -1.42
HERPUD2-204ENST00000426180 LAMA2P24043 3122 aaKnown RBP6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 C5orf67F2Z3F1 127 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 H3BNC9 293 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 IKBKBO14920 756 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 TADA2AO75478 443 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 B3GAT3O94766 335 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 FGFR1OPO95684 399 aaKnown RBP6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 HLA-DRAP01903 254 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 TNNC2P02585 160 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 KRT19P08727 400 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 RPL9P32969 192 aaKnown RBP6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 MTIF2P46199 727 aaKnown RBP6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 ALDH7A1P49419 539 aaKnown RBP6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 AARSP49588 968 aaKnown RBP eCLIP6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 FXR1P51114 621 aaKnown RBP eCLIP6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 LILRA4P59901 499 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 ERVFC1P60507 584 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 RBP5P82980 135 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 FOXK2Q01167 660 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 PLCB3Q01970 1234 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 SRSF11Q05519 484 aaKnown RBP6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 BIRC3Q13489 604 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 GPM6BQ13491 265 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 ADGRE1Q14246 886 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 KRT31Q15323 416 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 SURF1Q15526 300 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 PTPN21Q16825 1174 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 ZACNQ401N2 412 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 TIGD5Q53EQ6 642 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 TCP11X2Q5H9J9 407 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 RTP2Q5QGT7 225 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 SPOPLQ6IQ16 392 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 LYPD4Q6UWN0 246 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 APTXQ7Z2E3 356 aaKnown RBP6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 DDX53Q86TM3 631 aaKnown RBP6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 NT5DC4Q86YG4 428 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 RNF168Q8IYW5 571 aaPredicted RBP6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 RNF214Q8ND24 703 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 ADAM32Q8TC27 787 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 TAS1R2Q8TE23 839 aa6.15□□□□□ -1.42
HERPUD2-204ENST00000426180 CACTINQ8WUQ7 758 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms