RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 NAP1L1P55209 391 aaKnown RBP16■□□□□ 0.15
CALD1-206ENST00000424922 C2orf54Q08AI8 447 aa16■□□□□ 0.15
CALD1-206ENST00000424922 GLE1Q53GS7 698 aaKnown RBP16■□□□□ 0.15
CALD1-206ENST00000424922 CCNI2Q6ZMN8 369 aaPredicted RBP16■□□□□ 0.15
CALD1-206ENST00000424922 NOP9Q86U38 636 aaKnown RBP16■□□□□ 0.15
CALD1-206ENST00000424922 OLIG1Q8TAK6 271 aa16■□□□□ 0.15
CALD1-206ENST00000424922 LNX1Q8TBB1 728 aaPredicted RBP16■□□□□ 0.15
CALD1-206ENST00000424922 EPS8L1Q8TE68 723 aa16■□□□□ 0.15
CALD1-206ENST00000424922 TSPAN18Q96SJ8 248 aa16■□□□□ 0.15
CALD1-206ENST00000424922 AGPAT1Q99943 283 aa16■□□□□ 0.15
CALD1-206ENST00000424922 SEPT11Q9NVA2 429 aaKnown RBP16■□□□□ 0.15
CALD1-206ENST00000424922 NOCTQ9UK39 431 aaKnown RBP16■□□□□ 0.15
CALD1-206ENST00000424922 A0A0A6YYK5 440 aaPredicted RBP16■□□□□ 0.15
CALD1-206ENST00000424922 CYP11B1P15538 503 aa16■□□□□ 0.15
CALD1-206ENST00000424922 TNFAIP3P21580 790 aa16■□□□□ 0.15
CALD1-206ENST00000424922 SOX4Q06945 474 aaPredicted RBP16■□□□□ 0.15
CALD1-206ENST00000424922 FAAP100Q0VG06 881 aa16■□□□□ 0.15
CALD1-206ENST00000424922 CFAP221Q4G0U5 840 aa16■□□□□ 0.15
CALD1-206ENST00000424922 ALKBH5Q6P6C2 394 aaKnown RBP16■□□□□ 0.15
CALD1-206ENST00000424922 RTN4RL1Q86UN2 441 aaPredicted RBP16■□□□□ 0.15
CALD1-206ENST00000424922 SLC30A5Q8TAD4 765 aa16■□□□□ 0.15
CALD1-206ENST00000424922 VRTNQ9H8Y1 702 aa16■□□□□ 0.15
CALD1-206ENST00000424922 GOLGA2P5Q9HBQ8 144 aa16■□□□□ 0.15
CALD1-206ENST00000424922 CISHQ9NSE2 258 aa16■□□□□ 0.15
CALD1-206ENST00000424922 ARL5CA6NH57 179 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 XPOTO43592 962 aaKnown RBP15.99■□□□□ 0.15
CALD1-206ENST00000424922 ATF7P17544 494 aaPredicted RBP15.99■□□□□ 0.15
CALD1-206ENST00000424922 RAP1GAPP47736 663 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 PSEN1P49768 467 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 PDE6CP51160 858 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 AFF1P51825 1210 aaKnown RBP15.99■□□□□ 0.15
CALD1-206ENST00000424922 MYO1EQ12965 1108 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 GPNMBQ14956 572 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 C9orf57Q5W0N0 161 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 ZNF771Q7L3S4 317 aaPredicted RBP15.99■□□□□ 0.15
CALD1-206ENST00000424922 RPUSD2Q8IZ73 545 aaKnown RBP15.99■□□□□ 0.15
CALD1-206ENST00000424922 UBR7Q8N806 425 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 ANKLE1Q8NAG6 615 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 GSTCDQ8NEC7 633 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 PAWRQ96IZ0 340 aaKnown RBP15.99■□□□□ 0.15
CALD1-206ENST00000424922 TOX2Q96NM4 488 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 PPP1R10Q96QC0 940 aaKnown RBP15.99■□□□□ 0.15
CALD1-206ENST00000424922 RPS6KC1Q96S38 1066 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 HIPK3Q9H422 1215 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 RGS18Q9NS28 235 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 ATP11BQ9Y2G3 1177 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 GIT1Q9Y2X7 761 aa15.99■□□□□ 0.15
CALD1-206ENST00000424922 H3BQF6 201 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 NCK2O43639 380 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 TNFRSF8P28908 595 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 CDH8P55286 799 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 C1orf53Q5VUE5 145 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 DNAAF5Q86Y56 855 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 ECHDC2Q86YB7 292 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 RBBP8NLQ8NC74 664 aaPredicted RBP15.98■□□□□ 0.15
CALD1-206ENST00000424922 PACSIN1Q9BY11 444 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 BCO2Q9BYV7 579 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 PPP1R12CQ9BZL4 782 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 TSPYL1Q9H0U9 437 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 CNTN6Q9UQ52 1028 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 FAM170AA1A519 330 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 POLR3GO15318 223 aaPredicted RBP15.98■□□□□ 0.15
CALD1-206ENST00000424922 STAU1O95793 577 aaKnown RBP15.98■□□□□ 0.15
CALD1-206ENST00000424922 MMEP08473 750 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 SKIP12755 728 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 CHRNB2P17787 502 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 CYP3A5P20815 502 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 AARSP49588 968 aaKnown RBP eCLIP15.98■□□□□ 0.15
CALD1-206ENST00000424922 ZNF394Q53GI3 561 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 PALB2Q86YC2 1186 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 LINC01599Q8WXQ3 324 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 PGBD4Q96DM1 585 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 SCLYQ96I15 445 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 TMEM106CQ9BVX2 250 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 SDCBP2Q9H190 292 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 C11orf49Q9H6J7 331 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 SMYD3Q9H7B4 428 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 RSAD1Q9HA92 442 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 MED4Q9NPJ6 270 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 MIOSQ9NXC5 875 aa15.98■□□□□ 0.15
CALD1-206ENST00000424922 TMCO5BA8MYB1 307 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 PIRO00625 290 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 THP07101 528 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 H2AFZP0C0S5 128 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 P4HA1P13674 534 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 SCNN1GP51170 649 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 CCL23P55773 120 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 BPIFB4P59827 614 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 TNNC1P63316 161 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 SLC24A5Q71RS6 500 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 H2AFVQ71UI9 128 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 LRRC52Q8N7C0 313 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 DBF4BQ8NFT6 615 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 DDX1Q92499 740 aaKnown RBP15.97■□□□□ 0.15
CALD1-206ENST00000424922 FAXDC2Q96IV6 333 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 FTHL17Q9BXU8 183 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 GEMIN8Q9NWZ8 242 aaKnown RBP15.97■□□□□ 0.15
CALD1-206ENST00000424922 C9IYK1 514 aa15.97■□□□□ 0.15
CALD1-206ENST00000424922 YWHAEP62258 255 aaKnown RBP15.97■□□□□ 0.15
CALD1-206ENST00000424922 FMO1Q01740 532 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms